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以前被解释为啮齿动物鸟氨酸脱羧酶mRNA异常前导序列的可能的克隆假象——一个警示故事。

Probable cloning artefacts previously interpreted as unusual leader sequences of rodent ornithine decarboxylase mRNAs--a cautionary tale.

作者信息

Coffino P

机构信息

Department of Medicine, University of California, San Francisco 94143.

出版信息

Gene. 1988 Sep 30;69(2):365-8. doi: 10.1016/0378-1119(88)90448-9.

Abstract

Messenger RNAs that have structurally unusual 5' leaders attract interest and provoke conjecture. Cloning and sequencing of two rodent ornithine decarboxylase (ODC) cDNAs, those for mouse [Kahana and Nathans, Proc. Natl. Acad. Sci. USA 82 (1985) 1673-1677] and, recently as published in this journal, for rat [Van Kranen et al., Gene 60 (1987) 145-155], have indicated the presence of such features. In both cases, the leader is unusually long and contains multiple AUG start codons preceding that which encodes the N terminus of the protein. In addition, the leader of the rat clone contains a 54-nt perfect inverted repeat. Because ODC expression appears to be regulated translationally, functional implications immediately suggest themselves. Certain unusual features of the mouse cDNA have proven artefactual [Brabant et al., Proc. Natl. Acad. Sci. USA 85 (1988) 2200-2204; Katz and Kahana, J. Biol. Chem. 263 (1988) 7604-7609]. It is likely that the putative leader sequence of rat ODC cDNA also resulted from a cloning artefact.

摘要

具有结构异常5'前导序列的信使RNA引起了人们的兴趣并引发了推测。两种啮齿动物鸟氨酸脱羧酶(ODC)cDNA的克隆和测序,即小鼠的[卡哈纳和内森斯,《美国国家科学院院刊》82(1985)1673 - 1677],以及最近发表在本杂志上的大鼠的[范·克拉嫩等人,《基因》60(1987)145 - 155],都表明存在这样的特征。在这两种情况下,前导序列都异常长,并且在编码蛋白质N端的起始密码子之前包含多个AUG起始密码子。此外,大鼠克隆的前导序列包含一个54个核苷酸的完美反向重复序列。由于ODC的表达似乎是在翻译水平上受到调控的,其功能意义也就不言而喻了。小鼠cDNA的某些异常特征已被证明是人为造成的[布拉班特等人,《美国国家科学院院刊》85(1988)2200 - 2204;卡茨和卡哈纳,《生物化学杂志》263(1988)7604 - 7609]。大鼠ODC cDNA的推定前导序列很可能也是克隆人为产物导致的。

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