Abdullah Muhammad, Hassan Adeena, Rashid Sajid, Naeem Muhammad
Department of Biochemistry, Quaid-i-Azam University, Islamabad, Pakistan.
National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan.
J Mol Graph Model. 2020 Sep;99:107623. doi: 10.1016/j.jmgm.2020.107623. Epub 2020 Apr 21.
Dystrophin-β-dystroglycan interaction has gained a special attention during current years due to its association with the pathogenesis of muscular dystrophies. Dystrophin is an important component of dystrophin associated protein complex that functions in the normal physiology and cell signaling in addition to membrane stabilization and provides integrity to skeletal muscle fibers. WW, EF-hand and ZZ domains of dystrophin are known to bind with extreme C-terminal region of beta-dystroglycan (β-DG) containing PPxY motif and this interaction is experimentally proven to be coordinated and regulated by two tyrosine (Tyr and Tyr) residues in the C-terminus of beta-dystroglycan. These tyrosine residues are phosphorylated in adhesion dependent manner that disrupts dystrophin-β-DG interaction. The failure of dystrophin to interact with β-DG causes muscular dystrophies. In this study, we have performed molecular docking analysis of dystrophin with phosphorylated and mutated variants of β-DG to pinpoint the actual nature of this interaction at molecular level. We have discovered significant structural and conformational changes in β-DG molecule caused by mutations and tyrosine phosphorylation that alter the nature and site of its interaction with dystrophin. Our results not only support the previous findings but also bring to attention previously unreported discoveries about the nature of this interaction and behavior of different β-DG variants with dystrophin WW, EF-hand and ZZ domains.
近年来,由于肌营养不良蛋白与β-肌聚糖的相互作用与肌肉营养不良的发病机制相关,因而受到了特别关注。肌营养不良蛋白是肌营养不良蛋白相关蛋白复合体的重要组成部分,除了稳定细胞膜外,还在正常生理和细胞信号传导中发挥作用,并为骨骼肌纤维提供完整性。已知肌营养不良蛋白的WW、EF手型和ZZ结构域与含有PPxY基序的β-肌聚糖(β-DG)的极端C末端区域结合,并且实验证明这种相互作用由β-肌聚糖C末端的两个酪氨酸(Tyr和Tyr)残基协调和调节。这些酪氨酸残基以依赖黏附的方式磷酸化,从而破坏肌营养不良蛋白与β-DG的相互作用。肌营养不良蛋白与β-DG相互作用的失败会导致肌肉营养不良。在本研究中,我们对肌营养不良蛋白与β-DG的磷酸化和突变变体进行了分子对接分析,以在分子水平上确定这种相互作用的实际性质。我们发现,突变和酪氨酸磷酸化导致β-DG分子发生显著的结构和构象变化,从而改变了其与肌营养不良蛋白相互作用的性质和位点。我们的结果不仅支持了先前的发现,还揭示了关于这种相互作用的性质以及不同β-DG变体与肌营养不良蛋白的WW、EF手型和ZZ结构域相互作用行为的先前未报道的发现。