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Next generation sequencing characterizes HLA diversity in a registry population from the Netherlands.下一代测序技术对荷兰注册人群中的 HLA 多样性进行了特征描述。
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3
HLA Haplotype Frequencies and Genetic Profiles of the Kuwaiti Population.科威特人群的 HLA 单体型频率和遗传特征。
Med Princ Pract. 2020;29(1):39-45. doi: 10.1159/000499593. Epub 2019 Mar 15.
4
Hapl-o-Mat: open-source software for HLA haplotype frequency estimation from ambiguous and heterogeneous data.单倍型矩阵(Hapl-o-Mat):用于从模糊和异质数据估计HLA单倍型频率的开源软件。
BMC Bioinformatics. 2017 May 30;18(1):284. doi: 10.1186/s12859-017-1692-y.
5
PyHLA: tests for the association between HLA alleles and diseases.PyHLA:用于检测HLA等位基因与疾病之间关联的测试。
BMC Bioinformatics. 2017 Feb 6;18(1):90. doi: 10.1186/s12859-017-1496-0.
6
Clinical Relevance of HLA Gene Variants in HBV Infection.HBV 感染中 HLA 基因变异的临床意义。
J Immunol Res. 2016;2016:9069375. doi: 10.1155/2016/9069375. Epub 2016 May 8.
7
Hepatitis B virus burden in developing countries.发展中国家的乙肝病毒负担
World J Gastroenterol. 2015 Nov 14;21(42):11941-53. doi: 10.3748/wjg.v21.i42.11941.
8
The IPD and IMGT/HLA database: allele variant databases.国际参与者数据(IPD)和国际免疫遗传学信息系统/HLA数据库:等位基因变异数据库。
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9
Six-locus high resolution HLA haplotype frequencies derived from mixed-resolution DNA typing for the entire US donor registry.六位点高分辨 HLA 单倍型频率来自于整个美国供者库的混合分辨率 DNA 分型。
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10
Relationship between HLA-DR gene polymorphisms and outcomes of hepatitis B viral infections: a meta-analysis.HLA-DR 基因多态性与乙型肝炎病毒感染结局的关系:荟萃分析。
World J Gastroenterol. 2012 Jun 28;18(24):3119-28. doi: 10.3748/wjg.v18.i24.3119.

乙型肝炎感染结局与加纳人群中新的人类白细胞抗原变异体相关。

Hepatitis B infection outcome is associated with novel human leukocyte antigen variants in Ghanaian cohort.

机构信息

West African Centre for Cell Biology of Infectious Pathogens, College of Basic and Applied Sciences, University of Ghana, Legon LG54, Ghana.

Department of Biochemistry, Cell and Molecular Biology, College of Basic and Applied Sciences, University of Ghana, Legon LG54, Ghana.

出版信息

Exp Biol Med (Maywood). 2020 May;245(9):815-822. doi: 10.1177/1535370220921118. Epub 2020 Apr 29.

DOI:10.1177/1535370220921118
PMID:32349537
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7273892/
Abstract

Genetic association studies can determine the effect size of gene loci on disease outcomes. In the arena of HBV infections, HLA alleles that associate with HBV outcomes can be used in clinical management decisions. This potential translational utility can shape the future management of HBV infections by identifying at-risk individuals and tailoring medical interventions accordingly. This precision medicine motif is currently only a nascent idea. However, it has stakes that may well override the current "wait and see" approach of clinical management of HBV infections. Here, we have identified HLA alleles associated with HBV outcome in a Ghanaian cohort. Our findings support the motif that HLA alleles associate with HBV outcome along geo-ethnic lines. This buttresses the need for further population pivoted studies. In the long term, our findings add to efforts towards the development of an HLA molecular-based algorithm for predicting HBV infection outcomes.

摘要

遗传关联研究可以确定基因座对疾病结果的影响大小。在乙型肝炎病毒 (HBV) 感染领域,与 HBV 结果相关的 HLA 等位基因可用于临床管理决策。这种潜在的转化效用可以通过识别高危个体并相应地调整医疗干预措施来塑造 HBV 感染的未来管理。这种精准医疗模式目前只是一个初步的想法。然而,它的利害关系很可能超过目前 HBV 感染临床管理的“等待观察”方法。在这里,我们在加纳队列中确定了与 HBV 结果相关的 HLA 等位基因。我们的研究结果支持 HLA 等位基因与 HBV 结果在地理民族线上相关的模式。这就需要进一步开展以人群为中心的研究。从长远来看,我们的研究结果为开发基于 HLA 分子的算法预测 HBV 感染结果的努力做出了贡献。