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小型养猪场粪便和土壤中产 CMY 型耐药基因的遗传多样性。

Genetic Diversity of Multidrug-Resistant CMY-Producing from Feces and Soil in a Small-Scale Pig Farm.

机构信息

Departamento de Análises Clínicas, Toxicológicas e Bromatológicas, Faculdade de Ciências Farmacêuticas de Ribeirão Preto, Universidade de São Paulo (USP), Ribeirão Preto, Brazil.

出版信息

Microb Drug Resist. 2020 Nov;26(11):1365-1371. doi: 10.1089/mdr.2020.0090. Epub 2020 May 6.

Abstract

Diarrheagenic cause diarrheal diseases, which are a public health concern and affect mainly developing countries. Multidrug-resistant (MDR) pathogens have been spreading in different sources, including animals and the environment. strains were obtained from a small-scale pig farm and 33 antimicrobials were tested. All strains were classified as MDR and harbored several antimicrobial resistance genes (ARGs) [, , , , , A, , , , , , , and A] and plasmids. Besides, mutations in quinolone resistance-determining region of GyrA (Ser83Leu and Asp87Asn) and ParC (Glu84Asp) were detected. Among the MDR nine strains (52%) presented diarrheagenic virulence genes, including genes related to Shiga toxin-producing (STEC), enteroinvasive (EIEC), and enteroaggregative (EAEC). The pulsed-field gel electrophoresis results showed a high genetic diversity among the MDR strains. Multilocus sequence typing (MLST) analyses revealed different sequence types phylogenetically related to each other, including ST10 and ST56. Subtyping of MLST by gene showed different . This study shows a high genetic diversity among MDR ARG-producing belonging to STEC, EIEC, and EAEC pathotypes obtained from a small-scale pig farm and contributes to the monitoring of antimicrobial-resistant pathogens worldwide, mainly in environmental samples, which are associated with One Health framework.

摘要

致泻性病原体可引起腹泻病,这是一个公共卫生关注点,主要影响发展中国家。多药耐药(MDR)病原体已在不同来源(包括动物和环境)中传播。从一个小型养猪场获得了菌株,并测试了 33 种抗生素。所有菌株均被归类为 MDR,并携带多种抗生素耐药基因(ARGs)[、、、、、A、、、、、、和 A]和质粒。此外,还检测到 GyrA(Ser83Leu 和 Asp87Asn)和 ParC(Glu84Asp)喹诺酮耐药决定区的突变。在这 9 株 MDR 菌株中(52%)存在致泻性毒力基因,包括与产志贺毒素大肠杆菌(STEC)、肠侵袭性大肠杆菌(EIEC)和肠聚集性大肠杆菌(EAEC)相关的基因。脉冲场凝胶电泳结果显示 MDR 菌株之间存在高度遗传多样性。多位点序列分型(MLST)分析显示,彼此之间具有亲缘关系的不同序列型,包括 ST10 和 ST56。通过基因的 MLST 亚型分析显示出不同的克隆型。本研究显示从小型养猪场获得的属于 STEC、EIEC 和 EAEC 血清型的 MDR-ARG 产生菌具有高度遗传多样性,有助于监测全球范围内的抗微生物耐药病原体,特别是与“One Health”框架相关的环境样本中的病原体。

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