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[细菌中蛋白质的热稳定性和重折叠由两个不同的ATP依赖伴侣蛋白组的活性决定]

[Thermostability and Refolding of Proteins in Bacteria Is Determined by the Activity of Two Different ATP-Dependent Chaperone Groups].

作者信息

Zavilgelsky G B, Gnuchikh E Yu, Melkina O E

机构信息

State Research Institute for Genetics and Selection of Industrial Microorganisms of National Research Center "Kurchatov Institute", Moscow, 117545 Russia.

出版信息

Mol Biol (Mosk). 2020 Mar-Apr;54(2):300-307. doi: 10.31857/S0026898420020196.

Abstract

The thermal stability of protein enzymes is determined in vitro by measuring the enzymatic activity during incubation at constant temperature. Refolding of thermal inactivated enzymes is carried out both in vitro and in vivo, in the presence of chaperones, usually at temperature optimal for the particular enzyme for the manifestation of enzymatic activity. In the present work thermal stability of enzymes in vitro (using purified preparations) and in vivo (directly in the bacterial cell) has been determined. Bacterial luciferases of Aliivibrio fischeri, Photobacterium leiognathi and Photorhabdus luminescens as protein substrates have been used. It is shown that the thermal stability of the P. luminescens and P. leiognathi luciferases in vivo in the Escherichia coli MG1655 dnaK^(+) and PK202 ΔdnaKJ14 strains is considerable higher than the thermal stability of "cell-free extract" luciferases. When an uncoupler of oxidative phosphorylation the carbonyl-cyanide-3-chlorophenylhydrazone (CCCP) that reduce the intracellular concentration of ATP to a minimum level, and the volatile hydrophobic substance (-)-Limonene (C10H16) as an inhibitor of chaperone-dependent refolding are added to the medium, the thermal stability of luciferases reduces almost to the level which is characteristic for the purified protein preparation. It is shown that the ATP-dependent chaperones ClpA and ClpB are essential for the increase of thermostability of luciferases in bacterial cells. Also, it is shown that the DnaKJE-dependent refolding of thermoinactivated luciferases is practically absent if the protonophore СССР or the hydrophobic substance (-)-Limonene was added to the bacterial suspension. Taking the data presented in this paper into account, it is necessary to consider the presence in bacterial cells of two different groups of ATP-dependent chaperones: 1st group (DnaKJE, GroEL/ES) is able to conduct the refolding both at low temperature after protein thermal inactivation and at high temperature at which protein thermal inactivation occurs; 2nd group (ClpA,ClpB, and possibly still unknown chaperones) is unable to conduct the standard refolding (i.e. at low temperature), but capable due to the hydrolysis energy of ATP of maintaining nonequilibrium stabilization of protein native forms at high temperature.

摘要

蛋白质酶的热稳定性是通过在恒温孵育过程中测量酶活性在体外确定的。热失活酶的重折叠在体外和体内进行,在伴侣蛋白存在的情况下,通常在特定酶表现出酶活性的最适温度下进行。在本工作中,已确定了酶在体外(使用纯化制剂)和体内(直接在细菌细胞中)的热稳定性。使用了费氏弧菌、利氏发光杆菌和发光光杆状菌的细菌荧光素酶作为蛋白质底物。结果表明,发光光杆状菌和利氏发光杆菌荧光素酶在大肠杆菌MG1655 dnaK^(+)和PK202 ΔdnaKJ14菌株体内的热稳定性明显高于“无细胞提取物”荧光素酶的热稳定性。当向培养基中添加将细胞内ATP浓度降低到最低水平的氧化磷酸化解偶联剂羰基氰化物-3-氯苯腙(CCCP)以及作为伴侣蛋白依赖性重折叠抑制剂的挥发性疏水物质(-)-柠檬烯(C10H16)时,荧光素酶的热稳定性几乎降低到纯化蛋白质制剂的特征水平。结果表明,ATP依赖性伴侣蛋白ClpA和ClpB对于提高细菌细胞中荧光素酶的热稳定性至关重要。此外,结果表明,如果将质子载体CCCP或疏水物质(-)-柠檬烯添加到细菌悬浮液中,热失活荧光素酶的DnaKJE依赖性重折叠实际上不存在。考虑到本文提供的数据,有必要考虑细菌细胞中存在两组不同的ATP依赖性伴侣蛋白:第一组(DnaKJE、GroEL/ES)能够在蛋白质热失活后的低温下以及蛋白质发生热失活的高温下进行重折叠;第二组(ClpA、ClpB,可能还有仍未知的伴侣蛋白)无法进行标准重折叠(即在低温下),但能够由于ATP的水解能量在高温下维持蛋白质天然形式的非平衡稳定。

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