Callahan Cody J, Lee Rose, Zulauf Katelyn E, Tamburello Lauren, Smith Kenneth P, Previtera Joe, Cheng Annie, Green Alex, Abdul Azim Ahmed, Yano Amanda, Doraiswami Nancy, Kirby James E, Arnaout Ramy A
Department of Radiology, Beth Israel Deaconess Medical Center, Boston, Massachusetts, USA.
Clinical Microbiology Laboratories, Division of Clinical Pathology, Department of Pathology, Beth Israel Deaconess Medical Center, Boston, Massachusetts, USA.
J Clin Microbiol. 2020 Jul 23;58(8). doi: 10.1128/JCM.00876-20.
The pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused a severe international shortage of the nasopharyngeal swabs that are required for collection of optimal specimens, creating a critical bottleneck blocking clinical laboratories' ability to perform high-sensitivity virological testing for SARS-CoV-2. To address this crisis, we designed and executed an innovative, cooperative, rapid-response translational-research program that brought together health care workers, manufacturers, and scientists to emergently develop and clinically validate new swabs for immediate mass production by 3D printing. We performed a multistep preclinical evaluation of 160 swab designs and 48 materials from 24 companies, laboratories, and individuals, and we shared results and other feedback via a public data repository (http://github.com/rarnaout/Covidswab/). We validated four prototypes through an institutional review board (IRB)-approved clinical trial that involved 276 outpatient volunteers who presented to our hospital's drive-through testing center with symptoms suspicious for COVID-19. Each participant was swabbed with a reference swab (the control) and a prototype, and SARS-CoV-2 reverse transcriptase PCR (RT-PCR) results were compared. All prototypes displayed excellent concordance with the control (κ = 0.85 to 0.89). Cycle threshold ( ) values were not significantly different between each prototype and the control, supporting the new swabs' noninferiority (Mann-Whitney U [MWU] test, > 0.05). Study staff preferred one of the prototypes over the others and preferred the control swab overall. The total time elapsed between identification of the problem and validation of the first prototype was 22 days. Contact information for ordering can be found at http://printedswabs.org Our experience holds lessons for the rapid development, validation, and deployment of new technology for this pandemic and beyond.
严重急性呼吸综合征冠状病毒2(SARS-CoV-2)引发的大流行导致用于采集最佳样本的鼻咽拭子出现严重的国际短缺,这成为了一个关键瓶颈,阻碍了临床实验室对SARS-CoV-2进行高灵敏度病毒学检测的能力。为应对这一危机,我们设计并实施了一项创新、合作、快速响应的转化研究计划,该计划将医护人员、制造商和科学家聚集在一起,紧急开发并通过临床验证新的拭子,以便通过3D打印立即进行大规模生产。我们对来自24家公司、实验室和个人的160种拭子设计和48种材料进行了多步骤临床前评估,并通过公共数据存储库(http://github.com/rarnaout/Covidswab/)分享了结果和其他反馈。我们通过一项经机构审查委员会(IRB)批准的临床试验对四个原型进行了验证,该试验涉及276名门诊志愿者,他们因出现疑似COVID-19的症状而前往我院的免下车检测中心。每位参与者分别用一支参考拭子(对照)和一个原型进行采样,并比较SARS-CoV-2逆转录酶PCR(RT-PCR)结果。所有原型与对照均显示出极佳的一致性(κ = 0.85至0.89)。每个原型与对照之间的循环阈值( )值无显著差异,支持了新拭子的非劣效性(曼-惠特尼U [MWU]检验, > 0.05)。研究人员总体上更喜欢其中一个原型,而不是其他原型,并且更喜欢对照拭子。从发现问题到第一个原型验证之间总共耗时22天。订购的联系信息可在http://printedswabs.org上找到。我们的经验为这场大流行及以后新技术的快速开发、验证和部署提供了经验教训。