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鉴定智利草莓 FcXTH2,一种新型具有水解酶活性的木葡聚糖内切糖基转移酶/水解酶。

Characterization of FcXTH2, a Novel Xyloglucan Endotransglycosylase/Hydrolase Enzyme of Chilean Strawberry with Hydrolase Activity.

机构信息

Multidisciplinary Agroindustry Research Laboratory, Instituto de Ciencias Biomédicas, Universidad Autónoma de Chile, 3460000 Talca, Chile.

Functional Genomics, Biochemistry and Plant Physiology group, Instituto de Ciencias Biológicas, Universidad de Talca, 3460000 Talca, Chile.

出版信息

Int J Mol Sci. 2020 May 11;21(9):3380. doi: 10.3390/ijms21093380.

DOI:10.3390/ijms21093380
PMID:32403246
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7247008/
Abstract

Xyloglucan endotransglycosylase/hydrolases (XTHs) are cell wall enzymes with hydrolase (XEH) and/or endotransglycosylase (XET) activities. As they are involved in the modification of the xyloglucans, a type of hemicellulose present in the cell wall, they are believed to be very important in different processes, including growth, development, and fruit ripening. Previous studies suggest that XTHs might play a key role in development and ripening of fruit, and its characterization is pending. Therefore, in order to provide a biochemical characterization of the FcXTH2 enzyme to explain its possible role in strawberry development, the molecular cloning and the heterologous expression of were performed. The recombinant FcXTH2 was active and displayed mainly XEH activity. The optimal pH and temperature are 5.5 and 37 °C, respectively. A K value of 0.029 mg mL was determined. Additionally, its protein structural model was built through comparative modeling methodology. The model showed a typically β-jelly-roll type folding in which the catalytic motif was oriented towards the FcXTH2 central cavity. Using molecular docking, protein-ligand interactions were explored, finding better interaction with xyloglucan than with cellulose. The data provided groundwork for understanding, at a molecular level, the enzymatic mechanism of FcXTH2, an important enzyme acting during the development of the Chilean strawberry.

摘要

木葡聚糖内转糖基酶/水解酶(XTHs)是具有水解酶(XEH)和/或内转糖基酶(XET)活性的细胞壁酶。由于它们参与了木葡聚糖的修饰,木葡聚糖是细胞壁中存在的一种半纤维素,因此它们被认为在包括生长、发育和果实成熟在内的不同过程中非常重要。先前的研究表明,XTHs 可能在果实的发育和成熟中发挥关键作用,但其特征尚待研究。因此,为了提供 FcXTH2 酶的生化特征描述,以解释其在草莓发育中的可能作用,进行了分子克隆和异源表达。重组 FcXTH2 具有活性,主要表现出 XEH 活性。最佳 pH 和温度分别为 5.5 和 37°C。确定 K 值为 0.029mg mL。此外,通过比较建模方法构建了其蛋白质结构模型。该模型显示出典型的β-果冻卷折叠,其中催化基序朝向 FcXTH2 中心腔。通过分子对接探索了蛋白质-配体相互作用,发现与木葡聚糖的相互作用优于与纤维素的相互作用。该数据为理解 FcXTH2 的酶促机制提供了基础,FcXTH2 是智利草莓发育过程中起重要作用的一种酶。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b1f/7247008/0c19e8842312/ijms-21-03380-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b1f/7247008/02d4b88a4c4a/ijms-21-03380-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b1f/7247008/893f3c012872/ijms-21-03380-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b1f/7247008/0c19e8842312/ijms-21-03380-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b1f/7247008/02d4b88a4c4a/ijms-21-03380-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b1f/7247008/893f3c012872/ijms-21-03380-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b1f/7247008/0c19e8842312/ijms-21-03380-g003.jpg

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