Department of Life Sciences, University of Trieste, Trieste, Italy.
Laboratorio de Genética e Inmunología Molecular, Instituto de Biología, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile.
Front Immunol. 2020 Apr 30;11:758. doi: 10.3389/fimmu.2020.00758. eCollection 2020.
Big defensins are antimicrobial polypeptides believed to be the ancestors of β-defensins, the most evolutionary conserved family of host defense peptides (HDPs) in vertebrates. Nevertheless, big defensins underwent several independent gene loss events during animal evolution, being only retained in a limited number of phylogenetically distant invertebrates. Here, we explore the evolutionary history of this fascinating HDP family and investigate its patchy distribution in extant metazoans. We highlight the presence of big defensins in various classes of lophotrochozoans, as well as in a few arthropods and basal chordates (amphioxus), mostly adapted to life in marine environments. Bivalve mollusks often display an expanded repertoire of big defensin sequences, which appear to be the product of independent lineage-specific gene tandem duplications, followed by a rapid molecular diversification of newly acquired gene copies. This ongoing evolutionary process could underpin the simultaneous presence of canonical big defensins and non-canonical (β-defensin-like) sequences in some species. The big defensin genes of mussels and oysters, two species target of in-depth studies, are subjected to gene presence/absence variation (PAV), i.e., they can be present or absent in the genomes of different individuals. Moreover, big defensins follow different patterns of gene expression within a given species and respond differently to microbial challenges, suggesting functional divergence. Consistently, current structural data show that big defensin sequence diversity affects the 3D structure and biophysical properties of these polypeptides. We discuss here the role of the N-terminal hydrophobic domain, lost during evolution toward β-defensins, in the big defensin stability to high salt concentrations and its mechanism of action. Finally, we discuss the potential of big defensins as markers for animal health and for the nature-based design of novel therapeutics active at high salt concentrations.
大型防御素是一种抗菌多肽,被认为是β-防御素的祖先,β-防御素是脊椎动物中进化上最保守的宿主防御肽(HDP)家族。然而,在动物进化过程中,大型防御素经历了几次独立的基因丢失事件,仅在少数系统发育上相距较远的无脊椎动物中保留下来。在这里,我们探讨了这个引人入胜的 HDP 家族的进化历史,并研究了其在现存后生动物中的斑驳分布。我们强调了大型防御素在各种环节动物中的存在,以及一些节肢动物和基干脊索动物(文昌鱼)中的存在,它们大多适应海洋环境的生活。双壳贝类软体动物通常表现出一系列扩展的大型防御素序列,这些序列似乎是独立的谱系特异性基因串联重复的产物,随后是新获得的基因拷贝的快速分子多样化。这种持续的进化过程可能是某些物种中同时存在经典大型防御素和非经典(β-防御素样)序列的基础。贻贝和牡蛎这两个物种的大型防御素基因存在基因存在/缺失变异(PAV),即它们可以存在于不同个体的基因组中,也可以不存在。此外,大型防御素在给定物种内遵循不同的基因表达模式,并对微生物挑战做出不同的反应,表明它们存在功能分化。一致地,目前的结构数据表明,大型防御素序列多样性影响这些多肽的 3D 结构和生物物理特性。在这里,我们讨论了在向β-防御素进化过程中丢失的 N 端疏水区在大型防御素对高盐浓度的稳定性及其作用机制中的作用。最后,我们讨论了大型防御素作为动物健康标志物的潜力,以及基于自然的新型高盐浓度活性治疗药物的设计潜力。