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从内部冻结:内膜结合冰核蛋白 InaZ 在大肠杆菌和大肠杆菌噬菌体中的冰核形成。

Freezing from the inside: Ice nucleation in Escherichia coli and Escherichia coli ghosts by inner membrane bound ice nucleation protein InaZ.

机构信息

BIRD-C GmbH, Vienna 1030, Austria.

Max Planck Institute for Polymer Research, Mainz 55128, Germany.

出版信息

Biointerphases. 2020 May 19;15(3):031003. doi: 10.1116/1.5142174.

DOI:10.1116/1.5142174
PMID:32429672
Abstract

Ice nucleation (IN) active bacteria such as Pseudomonas syringae promote the growth of ice crystals more effectively than any material known. Using the specialized ice nucleation protein (INP) InaZ, P. syringae-the well studied epiphytic plant pathogen-attacks plants by frost damage and, likewise fascinating, drives ice nucleation within clouds when airborne in the atmosphere by linkage to the Earth's water cycle. While ice nucleation proteins play a tremendous role for life on the planet, the molecular details of their activity on the bacterial membrane surface are largely unknown. Bacterial ghosts (BGs) derived from Escherichia coli can be used as simplified model systems to study the mode of action of InaZ. In this work, the authors used BGs to study the role of InaZ localization on the luminal side of the bacterial inner membrane. Naturally, P. syringae INPs are displayed on the surface of the outer membrane; so in contrast, the authors engineered an N-terminal truncated form of inaZ lacking the transport sequence for anchoring of InaZ on the outer membrane. This construct was fused to N- and C-terminal inner membrane anchors and expressed in Escherichia coli C41. The IN activity of the corresponding living recombinant E. coli catalyzing interfacial ice formation of supercooled water at high subzero temperatures was tested by a droplet-freezing assay and surface spectroscopy. The median freezing temperature (T) of the parental living E. coli C41 cells without INP was detected at -20.1 °C and with inner membrane anchored INPs at a T value between -7 and -9 °C, demonstrating that the induction of IN from the inside of the bacterium by inner membrane anchored INPs facing the luminal inner membrane side is very similar to IN induced by bacterial INPs located at the outer membrane. Bacterial ghosts derived from these different constructs showed first droplet freezing values between -6 and -8 °C, whereas E. coli C41 BGs alone without carrying inner membrane anchored INPs exhibit a T of -18.9 °C. Sum frequency generation spectroscopy showed structural ordered water at the BG/water interface, which increased close to the water melting point. Together, this indicates that the more efficient IN of INP-BGs compared to their living parental strains can be explained by the free access of inner membrane anchored INP constructs to ultrapure water filling the inner space of the BGs.

摘要

冰核(IN)活性细菌,如丁香假单胞菌,比任何已知物质更有效地促进冰晶的生长。丁香假单胞菌是一种研究充分的植物病原菌,它通过霜害攻击植物,同时,当它在大气中作为空气传播物时,通过与地球水循环的联系,在云中引发冰核形成,这同样令人着迷。虽然冰核蛋白对地球上的生命起着巨大的作用,但它们在细菌膜表面上的活性的分子细节在很大程度上仍是未知的。源自大肠杆菌的细菌空泡(BG)可被用作研究 InaZ 作用模式的简化模型系统。在这项工作中,作者使用 BG 研究了 InaZ 在细菌内膜内腔侧的定位作用。天然的,丁香假单胞菌 INP 显示在外膜的表面;因此,相反地,作者设计了一种缺乏 InaZ 锚定在外膜上的运输序列的 N 端截短形式的 inaZ。该构建体被融合到 N 和 C 端内膜锚上,并在大肠杆菌 C41 中表达。相应的活重组大肠杆菌的 IN 活性通过无液滴冷冻测定和表面光谱法测试了超冷水界面冰形成的催化作用。没有 INP 的亲本活大肠杆菌 C41 细胞的中位冻结温度(T)检测到为-20.1°C,而带有内膜锚定 INP 的 T 值在-7 到-9°C 之间,表明由内膜锚定 INP 诱导的 IN 从细菌内部到面向内腔内膜侧的方向与位于外膜上的细菌 INP 诱导的 IN 非常相似。源自这些不同构建体的细菌空泡显示出的第一个液滴冻结值在-6 和-8°C 之间,而单独的没有携带内膜锚定 INP 的大肠杆菌 C41 BG 显示出-18.9°C 的 T 值。和频产生光谱法显示 BG/水界面处的结构有序水,其在接近水熔点时增加。总之,这表明与活亲本菌株相比,INP-BG 的更有效 IN 可以通过内膜锚定 INP 构建体对填充 BG 内部空间的超纯水的自由进入来解释。

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引用本文的文献

1
Ice nucleation proteins self-assemble into large fibres to trigger freezing at near 0 °C.冰核蛋白自组装成大型纤维,在接近 0°C 时引发冻结。
Elife. 2023 Dec 18;12:RP91976. doi: 10.7554/eLife.91976.
2
Ice nucleation proteins self-assemble into large fibres to trigger freezing at near 0 °C.冰核蛋白会自我组装成大纤维,从而在接近0°C时引发结冰。
bioRxiv. 2023 Oct 26:2023.08.03.551873. doi: 10.1101/2023.08.03.551873.
3
Water-organizing motif continuity is critical for potent ice nucleation protein activity.水组织基序连续性对于高效冰核蛋白活性至关重要。
Nat Commun. 2022 Aug 26;13(1):5019. doi: 10.1038/s41467-022-32469-9.
4
Ice-nucleating proteins are activated by low temperatures to control the structure of interfacial water.冰核蛋白在低温下被激活,以控制界面水的结构。
Nat Commun. 2021 Feb 19;12(1):1183. doi: 10.1038/s41467-021-21349-3.