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无催化活性的 T7 DNA 聚合酶会造成致命的复制障碍。

Catalytically inactive T7 DNA polymerase imposes a lethal replication roadblock.

机构信息

Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts, USA.

Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts, USA

出版信息

J Biol Chem. 2020 Jul 10;295(28):9542-9550. doi: 10.1074/jbc.RA120.013738. Epub 2020 May 19.

Abstract

Bacteriophage T7 encodes its own DNA polymerase, the product of gene 5 (gp5). In isolation, gp5 is a DNA polymerase of low processivity. However, gp5 becomes highly processive upon formation of a complex with thioredoxin, the product of the gene. Expression of a gp5 variant in which aspartate residues in the metal-binding site of the polymerase domain were replaced by alanine is highly toxic to cells. This toxicity depends on the presence of a functional allele and T7 RNA polymerase-driven expression but is independent of the exonuclease activity of gp5. , the purified gp5 variant is devoid of any detectable polymerase activity and inhibited DNA synthesis by the replisomes of and T7 in the presence of thioredoxin by forming a stable complex with DNA that prevents replication. On the other hand, the highly homologous Klenow fragment of DNA polymerase I containing an engineered gp5 thioredoxin-binding domain did not exhibit toxicity. We conclude that gp5 alleles encoding inactive polymerases, in combination with thioredoxin, could be useful as a shutoff mechanism in the design of a bacterial cell-growth system.

摘要

噬菌体 T7 编码其自身的 DNA 聚合酶,该酶的产物是基因 5(gp5)。gp5 本身是一种具有低延伸性的 DNA 聚合酶。然而,gp5 与硫氧还蛋白(基因产物)形成复合物后,延伸性会大大提高。在聚合酶结构域的金属结合位点中,用丙氨酸取代天冬氨酸残基的 gp5 变体的表达对细胞具有高度毒性。这种毒性依赖于有功能的等位基因和 T7 RNA 聚合酶驱动的表达,但不依赖于 gp5 的外切核酸酶活性。纯化的 gp5 变体几乎没有任何可检测到的聚合酶活性,并且在硫氧还蛋白存在的情况下,通过与 DNA 形成稳定的复合物来抑制噬菌体和 T7 的复制体的 DNA 合成,从而阻止复制。另一方面,含有工程化的 gp5 硫氧还蛋白结合结构域的高度同源的 DNA 聚合酶 I 的 Klenow 片段没有表现出毒性。我们得出结论,编码无活性聚合酶的 gp5 等位基因与硫氧还蛋白结合,可能成为设计细菌细胞生长系统的一种有效的关闭机制。

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