Kenison Erin K, Hernández-Gómez Obed, Williams Rod N
Department of Forestry and Natural Resources, Purdue University, 715 W. State Street, West Lafayette, IN 47907, USA.
Idaho Fish and Wildlife Office, U.S. Fish and Wildlife Service, 1387 S. Vinnell Way, Boise, ID 83706, USA.
Conserv Physiol. 2020 May 14;8(1):coaa040. doi: 10.1093/conphys/coaa040. eCollection 2020.
Captive environments are maintained in hygienic ways that lack free-flowing microbes found in animals' natural environments. As a result, captive animals often have depauperate host-associated microbial communities compared to conspecifics in the wild and may have increased disease susceptibility and reduced immune function. Eastern hellbenders () have suffered precipitous population declines over the past few decades. To bolster populations, eastern hellbenders are reared in captivity before being translocated to the wild. However, the absence of natural microbial reservoirs within the captive environment diminishes the diversity of skin-associated bacteria on hellbender skin and may negatively influence their ability to defend against pathogenic species once they are released into the wild. To prepare hellbenders for natural bacteria found in riverine environments, we devised a novel bioaugmentation method to increase the diversity of skin microbial communities within a captive setting. We exposed juvenile hellbenders to increasing amounts of river water over 5 weeks before translocating them to the river. We genetically identified and phylogenetically compared bacteria collected from skin swabs and river water for alpha (community richness) and beta (community composition) diversity estimates. We found that hellbenders exposed to undiluted river water in captivity had higher alpha diversity and distinct differentiation in the community composition on their skin, compared to hellbenders only exposed to well water. We also found strong evidence that hellbender skin microbiota is host-specific rather than environmentally driven and is colonized by rare environmental operational taxonomic units in river water. This technique may increase hellbender translocation success as increasing microbial diversity is often correlated with elevated disease resistance. Future work is necessary to refine our methods, investigate the relationship between microbial diversity and hellbender health and understand how this bioaugmentation technique influences hellbenders' survival following translocation from captivity into the wild.
圈养环境的维护方式较为卫生,缺乏动物自然环境中自由流动的微生物。因此,与野生同类相比,圈养动物的宿主相关微生物群落往往较为贫乏,可能会增加疾病易感性并降低免疫功能。在过去几十年里,东部隐鳃鲵()的种群数量急剧下降。为了增加种群数量,东部隐鳃鲵在被放归野外之前会在圈养环境中饲养。然而,圈养环境中缺乏天然微生物库,这减少了隐鳃鲵皮肤上与皮肤相关细菌的多样性,可能会对它们放归野外后抵御致病物种的能力产生负面影响。为了让隐鳃鲵适应河流环境中发现的天然细菌,我们设计了一种新颖的生物强化方法,以增加圈养环境中皮肤微生物群落的多样性。在将幼年隐鳃鲵放归河流之前,我们在5周内让它们接触越来越多的河水。我们对从皮肤拭子和河水中收集的细菌进行了基因鉴定,并在系统发育上进行了比较,以估计α(群落丰富度)和β(群落组成)多样性。我们发现,与仅接触井水的隐鳃鲵相比,在圈养环境中接触未稀释河水的隐鳃鲵具有更高的α多样性,并且其皮肤上的群落组成有明显差异。我们还发现有力证据表明,隐鳃鲵的皮肤微生物群是宿主特异性的,而非由环境驱动,并且会被河水中罕见的环境操作分类单元定殖。由于微生物多样性的增加通常与抗病能力的提高相关,这项技术可能会提高隐鳃鲵放归的成功率。未来有必要改进我们的方法,研究微生物多样性与隐鳃鲵健康之间的关系,并了解这种生物强化技术如何影响隐鳃鲵从圈养环境放归野外后的生存情况。