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利用磁感应循环仪(MIC)获得的高分辨率熔解曲线(HRMP)已被用于监测下一代肿瘤测序(NGTS)强调的 BRCA2 状态:一种在诊断环境中的联合方法。

High resolution melting profiles (HRMPs) obtained by magnetic induction cycler (MIC) have been used to monitor the BRCA2 status highlighted by next generation tumor sequencing (NGTS): a combined approach in a diagnostic environment.

机构信息

Molecular and Genomic Diagnostics Unit, Fondazione Policlinico Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Rome, Italy.

Division of Oncological Gynecology, Department of Women's and Children's Health, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy.

出版信息

Mol Biol Rep. 2020 Jun;47(6):4897-4903. doi: 10.1007/s11033-020-05504-5. Epub 2020 May 28.

Abstract

Resistance can be the result of secondary tissue variants (STVs), which restore the open reading frame of the germline BRCA allele, producing functional BRCA protein in germline BRCA1/2 (BRCA) pathogenic variant (PV) carriers, treated with platinum-based chemotherapy or poly-(ADP-ribose) polymerase inhibitors (PARP-1). We reported recently a BRCA2 mutant high grade serous ovarian cancer (HGSOC) patient with acquired resistance to the PARP-1 olaparib due to a STV detected by next generation tumor sequencing (NGTS). The aim of this study was to evaluate the versatility of the high-resolution melting analysis (HRMA) obtained by magnetic induction cycler (MIC) to monitor the BRCA2 status in formalin-fixed paraffin-embedded (FFPE) tissue samples of this patient and to compare the results obtained by NGTS. HRMA highlighted the BRCA2 STV previously detected in the IIIrd HGSOC recurrence following the tissue BRCA2 tissue status comparing the high resolution melting profiles (HRMPs). HRMPs differentiate not only BRCA2 alleles, but also their different allele abundance. We underline that (1) the MIC uses a latest generation technology guaranteeing temperature uniformity and maintenance in each well allowing high and accurate performance to obtain reported results and (2) the HRMA maintains a high sensitivity and specificity when it is performed on FFPE samples. Finally, this study represents an additional use of the HRMA, confirming its extreme versatility in the diagnostic environment.

摘要

耐药性可能是次级组织变体 (STV) 的结果,这些变体恢复了种系 BRCA 等位基因的开放阅读框,从而在种系 BRCA1/2 (BRCA) 致病性变异 (PV) 携带者中产生功能性 BRCA 蛋白,这些携带者接受铂类化疗或聚 (ADP-核糖) 聚合酶抑制剂 (PARP-1) 治疗。我们最近报道了一例 BRCA2 突变的高级别浆液性卵巢癌 (HGSOC) 患者,由于下一代肿瘤测序 (NGTS) 检测到的 STV,对 PARP-1 奥拉帕利产生获得性耐药。本研究旨在评估通过磁感应循环器 (MIC) 获得的高分辨率熔解分析 (HRMA) 在监测该患者福尔马林固定石蜡包埋 (FFPE) 组织样本中 BRCA2 状态的多功能性,并比较 NGTS 获得的结果。HRMA 强调了在 III 次 HGSOC 复发后,通过组织 BRCA2 组织状态比较高分辨率熔解曲线 (HRMPs),先前在该患者中检测到的 BRCA2 STV。HRMPs 不仅区分 BRCA2 等位基因,还区分其不同的等位基因丰度。我们强调 (1) MIC 使用最新一代技术,保证每个孔的温度均匀性和保持,从而实现高而准确的性能,以获得报告的结果,以及 (2) HRMA 在对 FFPE 样本进行时保持高灵敏度和特异性。最后,本研究代表了 HRMA 的另一种用途,证实了其在诊断环境中的极端多功能性。

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