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硫脲/水络合物(硫脲-(HO))(n = 1,…,5)中的分子间氢键相互作用:X射线、密度泛函理论(DFT)、自然键轨道(NBO)、分子中的原子(AIM)和重新定域化密度梯度(RDG)分析

Intermolecular hydrogen bond interactions in the thiourea/water complexes (Thio-(HO)) (n = 1, …, 5): X-ray, DFT, NBO, AIM, and RDG analyses.

作者信息

Akman Feride, Issaoui Noureddine, Kazachenko Aleksandr S

机构信息

Vocational School of Technical Sciences, University of Bingöl, 12000, Bingol, Turkey.

Laboratory of Quantum and Statistical Physics (LR18ES18), Faculty of Sciences, University of Monastir, 5079, Monastir, Tunisia.

出版信息

J Mol Model. 2020 May 29;26(6):161. doi: 10.1007/s00894-020-04423-3.

Abstract

This study aims to experimentally and theoretically examine the nature and energy of intermolecular bond interactions between thiourea and water molecules using natural bond orbital (NBO), non-linear optical (NLO), atoms in molecules (AIM), and reduced density gradient (RDG) analyses based on the quantum chemical approach and spectroscopic analysis on X-ray and FTIR. Geometry optimizations of Thio-(HO) complexes were carried out in the gas phase by B3LYP/6-311++G(d,p) level of density functional theory. The nature of the molecular interactions between the water and thiourea through hydrogen bonding has been investigated using RDG and AIM methods. NBO analysis shows that the Thio-(HO) complex has higher stabilization energy values than the other complexes. The non-linear optical properties, such as dipole moment (μ), the polarizability (α), and the first hyperpolarizability (β), and thermodynamic functions, such as entropy (S), specific heat capacity (C), and thermal energy (E), were calculated using the same method. It was observed that thermodynamic parameters, polarizability, and the first hyperpolarizability increased with the number of water molecules. X-ray diffraction analysis confirmed that thiourea is single crystal, and the thiourea/water complexes are crystalline in nature. Besides, the infrared spectrum shows the existence of water molecules and it is used to get details of the structure of the complex.

摘要

本研究旨在通过基于量子化学方法的自然键轨道(NBO)、非线性光学(NLO)、分子中的原子(AIM)和密度降低梯度(RDG)分析以及X射线和傅里叶变换红外光谱(FTIR)分析,从实验和理论上研究硫脲与水分子之间分子间键相互作用的性质和能量。硫代 - (羟基)配合物的几何结构优化在气相中采用密度泛函理论的B3LYP/6 - 311++G(d,p)水平进行。利用RDG和AIM方法研究了水与硫脲之间通过氢键形成的分子间相互作用的性质。NBO分析表明,硫代 - (羟基)配合物比其他配合物具有更高的稳定能值。使用相同方法计算了非线性光学性质,如偶极矩(μ)、极化率(α)和第一超极化率(β),以及热力学函数,如熵(S)、比热容(C)和热能(E)。观察到热力学参数、极化率和第一超极化率随水分子数量增加而增加。X射线衍射分析证实硫脲为单晶,硫脲/水配合物本质上是晶体。此外,红外光谱显示了水分子的存在,并用于获取配合物结构的详细信息。

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