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蚜虫基因组的进化见解:蚜虫基因组学在质量问题和有趣的视角之间。

Evolutionary insights into the aphid genome: Aphid genomics between quality problems and intriguing perspectives.

机构信息

Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy.

Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy.

出版信息

Int Rev Cell Mol Biol. 2020;354:215-230. doi: 10.1016/bs.ircmb.2020.03.003. Epub 2020 Apr 3.

Abstract

In the last decade the genomes of several aphid species have been sequenced allowing a better understanding of their biology and evolution. Unfortunately, as frequently occurs with the next generation sequencing technologies, several aphid genomes consist in fragmented assemblies that contain thousands of genomic scaffolds of reduced length. In order to improve the quality of the published genomic data, several research groups are currently resequencing aphid DNA making possible to take the full advantage of genomics to face complex biological problems, such as aphid diversification. This review is aimed to discuss the current state of art in aphid genomics focusing in particular on the aspects that could improve our knowledge of their evolution.

摘要

在过去的十年中,已经对几种蚜虫物种的基因组进行了测序,从而使我们更好地了解它们的生物学和进化。不幸的是,正如经常发生的那样,随着下一代测序技术的出现,几种蚜虫基因组是由包含数千个缩短长度的基因组支架的碎片化组装组成的。为了提高已发表基因组数据的质量,目前有几个研究小组正在对蚜虫 DNA 进行重测序,这使得我们有可能充分利用基因组学来解决复杂的生物学问题,例如蚜虫的多样化。这篇综述旨在讨论蚜虫基因组学的最新进展,特别是讨论那些可以增进我们对其进化认识的方面。

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