Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Aobayama 6-6-07, Sendai 980-8579, Japan.
Panasonic corporation, Technology Innovation Division, Hikaridai 3-4, Seika-cho, Soraku-gun, Kyoto 619-0237, Japan.
Microbiology (Reading). 2020 Jul;166(7):659-668. doi: 10.1099/mic.0.000929.
Bis-(3'-5')-cyclic dimeric guanosine monophosphate (c-di-GMP) is a second messenger known to control a variety of bacterial processes. The model cyanobacterium, sp. PCC 6803, has a score of genes encoding putative enzymes for c-di-GMP synthesis and degradation. However, most of them have not been functionally characterized. Here, we chose four genes in (), which encode proteins with a GGDEF, diguanylate cyclase (DGC) catalytic domain and multiple Per-ARNT-Sim (PAS) conserved regulatory motifs, for detailed analysis. Purified DgcA, DgcB and DgcC were able to catalyze synthesis of c-di-GMP from two GTPs . DgcA had the highest activity, compared with DgcB and DgcC. DgcD did not show detectable activity. DgcA activity was specific for GTP and stimulated by the divalent cations, magnesium or manganese. Full activity of DgcA required the presence of the multiple PAS domains, probably because of their role in protein dimerization or stability. mutants carrying single deletions of were not affected in their growth rate or biofilm production during salt stress, suggesting that there was functional redundancy . In contrast, overexpression of resulted in increased biofilm formation in the absence of salt stress. In this study, we characterize the enzymatic and physiological function of DgcA-DgcD, and propose that the PAS domains in DgcA function in maintaining the enzyme in its active form.
双(3'-5')-环二鸟苷酸 (c-di-GMP) 是一种已知的第二信使,可控制多种细菌过程。模式蓝藻 sp. PCC 6803 具有编码 c-di-GMP 合成和降解的假定酶的大量基因。然而,其中大多数尚未进行功能表征。在这里,我们选择了 sp. PCC 6803 中的四个基因 (),它们编码具有 GGDEF、二鸟苷酸环化酶 (DGC) 催化结构域和多个 Per-ARNT-Sim (PAS) 保守调节基序的蛋白质,进行详细分析。纯化的 DgcA、DgcB 和 DgcC 能够从两个 GTPs 催化 c-di-GMP 的合成。与 DgcB 和 DgcC 相比,DgcA 的活性最高。DgcD 没有表现出可检测的活性。DgcA 活性特异性针对 GTP,并受二价阳离子镁或锰的刺激。DgcA 的完全活性需要存在多个 PAS 结构域,可能是因为它们在蛋白质二聚化或稳定性中的作用。携带 单个缺失的 突变体在盐胁迫下的生长速率或生物膜形成方面不受影响,表明存在功能冗余。相比之下,在没有盐胁迫的情况下, 的过表达导致生物膜形成增加。在这项研究中,我们表征了 DgcA-DgcD 的酶学和生理学功能,并提出 DgcA 中的 PAS 结构域在维持酶的活性形式方面发挥作用。