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计算探索和实验验证,以鉴定一种用于治疗阿尔茨海默病的胆碱酯酶和淀粉样β的双重抑制剂。

Computational exploration and experimental validation to identify a dual inhibitor of cholinesterase and amyloid-beta for the treatment of Alzheimer's disease.

机构信息

Pharmaceutical Chemistry Research Laboratory, Department of Pharmaceutical Engineering & Technology, Indian Institute of Technology (Banaras Hindu University), Varanasi, 221005, India.

出版信息

J Comput Aided Mol Des. 2020 Sep;34(9):983-1002. doi: 10.1007/s10822-020-00318-w. Epub 2020 Jun 3.

Abstract

The cholinesterases are essential targets implicated in the pathogenesis of Alzheimer's disease (AD). In the present study, virtual screening and molecular docking are performed to identify the potential hits. Docking-post processing (DPP) and pose filtration protocols against AChE and BChE resulted in three hits (AW00308, HTS04089, and JFD03947). Molecular Mechanics-Generalized Born Surface Area (MM-GBSA) and molecular dynamics simulation analysis affirmed the stability and binding pattern of the docked complex JFD03947, which was further synthesized and evaluated for in vitro cholinesterase inhibition (AChE, IC = 0.062 µM; BChE, IC = 1.482 µM) activity. The enzyme kinetics study of the JFD03947 against hAChE and hBChE suggested a mixed type of inhibition. The results of thioflavin T-assay also elicited anti-Aβ aggregation activity by JFD03947. Further, biological evaluation of identified compound JFD03947 also showed neuroprotective ability against the SH-SY5Y neuroblastoma cell lines.

摘要

乙酰胆碱酯酶和丁酰胆碱酯酶是阿尔茨海默病(AD)发病机制中必不可少的靶点。本研究通过虚拟筛选和分子对接来识别潜在的命中化合物。对接后处理(DPP)和针对 AChE 和 BChE 的构象过滤方案筛选出三个命中化合物(AW00308、HTS04089 和 JFD03947)。分子力学-广义 Born 表面积(MM-GBSA)和分子动力学模拟分析证实了 docked complex JFD03947 的稳定性和结合模式,进一步合成并评估了其体外乙酰胆碱酯酶抑制(AChE,IC = 0.062 µM;BChE,IC = 1.482 µM)活性。JFD03947 对 hAChE 和 hBChE 的酶动力学研究表明其抑制类型为混合抑制。Thioflavin T 分析的结果也表明 JFD03947 具有抗 Aβ 聚集活性。此外,对鉴定出的化合物 JFD03947 的进一步生物学评估还显示其对 SH-SY5Y 神经母细胞瘤细胞系具有神经保护作用。

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