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引用本文的文献

1
Long-read, chromosome-scale assembly of Vitis rotundifolia cv. Carlos and its unique resistance to Xylella fastidiosa subsp. fastidiosa.葡萄属圆叶葡萄 cv. 卡洛斯的长读、染色体级别的组装及其对韧皮部难养菌亚种的独特抗性。
BMC Genomics. 2023 Jul 20;24(1):409. doi: 10.1186/s12864-023-09514-y.

本文引用的文献

1
Pierce's Disease of Grapevines: A Review of Control Strategies and an Outline of an Epidemiological Model.葡萄 Pierce 病：防治策略综述及流行病学模型概述
Front Microbiol. 2018 Sep 12;9:2141. doi: 10.3389/fmicb.2018.02141. eCollection 2018.
2
Xylella fastidiosa: Insights into an Emerging Plant Pathogen.韧皮部杆菌：一种新兴植物病原体的研究进展。
Annu Rev Phytopathol. 2018 Aug 25;56:181-202. doi: 10.1146/annurev-phyto-080417-045849. Epub 2018 Jun 11.
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Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.全细菌生物信息学数据库与分析资源中心PATRIC的改进。
Nucleic Acids Res. 2017 Jan 4;45(D1):D535-D542. doi: 10.1093/nar/gkw1017. Epub 2016 Nov 29.
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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
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RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.RASTtk：一种用于构建定制注释管道和批量注释基因组的RAST算法的模块化可扩展实现。
Sci Rep. 2015 Feb 10;5:8365. doi: 10.1038/srep08365.
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QUAST: quality assessment tool for genome assemblies.QUAST：基因组组装质量评估工具。
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
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8
Multilocus sequence typing of Xylella fastidiosa causing Pierce's disease and oleander leaf scorch in the United States.美国引起皮尔氏病和夹竹桃叶枯病的韧皮部坏死菌的多位点序列分型。
Phytopathology. 2010 Jun;100(6):601-11. doi: 10.1094/PHYTO-100-6-0601.
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Mitochondrial DNA variation among populations of the glassy-winged sharpshooter, Homalodisca coagulata.玻璃翅叶蝉（Homalodisca coagulata）种群间的线粒体DNA变异
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从密西西比州南部种植的藤稔葡萄和圆叶葡萄中分离出的桑氏木质部杆菌亚种OK3、VB11和NOB1菌株的基因组序列草图

Draft Genome Sequences of Xylella fastidiosa subsp. Strains OK3, VB11, and NOB1, Isolated from Bunch and Muscadine Grapes Grown in Southern Mississippi.

作者信息

Mavrodi Olga V, Mavrodi Dmitri V, Stafne Eric T, Adamczyk John J, Babiker Ebrahiem M

机构信息

South Mississippi Branch Experiment Station, Mississippi State University, Poplarville, Mississippi, USA.

Center for Molecular and Cellular Biosciences, School of Biological, Environmental, and Earth Sciences, University of Southern Mississippi, Hattiesburg, Mississippi, USA.

出版信息

Microbiol Resour Announc. 2020 Jun 18;9(25):e00562-20. doi: 10.1128/MRA.00562-20.

DOI:10.1128/MRA.00562-20
PMID:32554794
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7303414/
Abstract

We report here high-quality draft whole-genome assemblies of subsp. strains OK3, VB11, and NOB1, which were isolated from symptomatic bunch and muscadine grape plants grown in southern Mississippi.

摘要

我们在此报告从密西西比州南部有症状的丛生葡萄和圆叶葡萄植株中分离出的亚种OK3、VB11和NOB1菌株的高质量全基因组草图组装。