CRISPR/Cas9 敲除人芳香胺 N-乙酰转移酶 1 在 MDA-MB-231 乳腺癌细胞中提示其在细胞代谢中的作用。

CRISPR/Cas9 knockout of human arylamine N-acetyltransferase 1 in MDA-MB-231 breast cancer cells suggests a role in cellular metabolism.

机构信息

Department of Pharmacology and Toxicology, University of Louisville School of Medicine, Louisville, KY, USA.

Center for Clinical and Translational Science, University of Alabama at Birmingham, Birmingham, AL, USA.

出版信息

Sci Rep. 2020 Jun 17;10(1):9804. doi: 10.1038/s41598-020-66863-4.

Abstract

Human arylamine N-acetyltransferase 1 (NAT1), present in all tissues, is classically described as a phase-II xenobiotic metabolizing enzyme but can also catalyze the hydrolysis of acetyl-Coenzyme A (acetyl-CoA) in the absence of an arylamine substrate using folate as a cofactor. NAT1 activity varies inter-individually and has been shown to be overexpressed in estrogen receptor-positive (ER+) breast cancers. NAT1 has also been implicated in breast cancer progression however the exact role of NAT1 remains unknown. The objective of this study was to evaluate the effect of varying levels of NAT1 N-acetylation activity in MDA-MB-231 breast cancer cells on global cellular metabolism and to probe for unknown endogenous NAT1 substrates. Global, untargeted metabolomics was conducted via ultra performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) on MDA-MB-231 breast cancer cell lines constructed with siRNA and CRISPR/Cas9 technologies to vary only in NAT1 N-acetylation activity. Many metabolites were differentially abundant in NAT1-modified cell lines compared to the Scrambled parental cell line. N-acetylasparagine and N-acetylputrescine abundances were strongly positively correlated (r = 0.986 and r = 0.944, respectively) with NAT1 N-acetylation activity whereas saccharopine abundance was strongly inversely correlated (r = -0.876). Two of the most striking observations were a reduction in de novo pyrimidine biosynthesis and defective β-oxidation of fatty acids in the absence of NAT1. We have shown that NAT1 expression differentially affects cellular metabolism dependent on the level of expression. Our results support the hypothesis that NAT1 is not just a xenobiotic metabolizing enzyme and may have a role in endogenous cellular metabolism.

摘要

人类芳香胺 N-乙酰基转移酶 1(NAT1)存在于所有组织中,经典地被描述为一种 II 相异生物代谢酶,但在没有芳基胺底物的情况下,也可以使用叶酸作为辅助因子催化乙酰辅酶 A(乙酰辅酶 A)的水解。NAT1 活性在个体间存在差异,并且已被证明在雌激素受体阳性(ER+)乳腺癌中过度表达。NAT1 也与乳腺癌的进展有关,但其确切作用仍不清楚。本研究的目的是评估 MDA-MB-231 乳腺癌细胞中不同水平的 NAT1 N-乙酰化活性对细胞整体代谢的影响,并探究未知的内源性 NAT1 底物。通过超高效液相色谱-串联质谱(UPLC-MS/MS)对 MDA-MB-231 乳腺癌细胞系进行了全局、非靶向代谢组学分析,这些细胞系通过 siRNA 和 CRISPR/Cas9 技术构建,仅在 NAT1 N-乙酰化活性上有所不同。与对照亲本细胞系相比,NAT1 修饰的细胞系中许多代谢物的丰度存在差异。N-乙酰天冬酰胺和 N-乙酰腐胺的丰度与 NAT1 N-乙酰化活性呈强烈正相关(r=0.986 和 r=0.944),而 saccharopine 的丰度与 NAT1 N-乙酰化活性呈强烈负相关(r=-0.876)。最引人注目的两个观察结果是在缺乏 NAT1 的情况下,嘧啶从头合成减少和脂肪酸β氧化缺陷。我们已经表明,NAT1 的表达水平不同会对细胞代谢产生不同的影响。我们的结果支持了这样一种假设,即 NAT1 不仅是一种异生物代谢酶,而且可能在细胞内代谢中发挥作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/605c/7299936/c30e56845196/41598_2020_66863_Fig1_HTML.jpg

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