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中国女性人群青春期相关候选基因的关联研究。

Association Study of Puberty-Related Candidate Genes in Chinese Female Population.

作者信息

Omariba Gideon, Xiao Junhua

机构信息

College of Chemistry, Chemical Engineering, And Biotechnology, Donghua University, Shanghai 201620, China.

出版信息

Int J Genomics. 2020 May 22;2020:1426761. doi: 10.1155/2020/1426761. eCollection 2020.

Abstract

Puberty is a transition period where a child transforms to an adult. Puberty can be affected by various genetic factors and environmental influences. In mammals, the regulation of puberty is enhanced by the hypothalamic-pituitary-gonadal axis (HPG axis). A number of genes such as GnRH, Kiss1, and GPR54 have been reported as key regulators of puberty onset. In this study, we have conducted an association study of puberty-related candidate genes in Chinese female population. Gene variations reported to be related with some traits in a population may not exist in others due to different genetic and ethnic backgrounds, hence the need for this kind of study. The genotyping of SNPs was based on multiplex PCR and the next-generation sequencing (NGS) platform of Illumina. We finally performed association study using PLINK software. Our results confirmed that SNPs rs34787247 in LIN28, rs74795793 and rs9347389 in OCT-1, and rs379202 and rs10491080 in ZEB1 genes showed a significant association with puberty. With the result, it is reasonable to conclude that these genes affect the process of puberty in Shanghai Chinese female population, yet the mechanism remains to be investigated by further study.

摘要

青春期是儿童向成人转变的过渡时期。青春期会受到多种遗传因素和环境影响。在哺乳动物中,下丘脑-垂体-性腺轴(HPG轴)增强了对青春期的调节。一些基因,如促性腺激素释放激素(GnRH)、亲吻素1(Kiss1)和G蛋白偶联受体54(GPR54),已被报道为青春期开始的关键调节因子。在本研究中,我们对中国女性人群中与青春期相关的候选基因进行了关联研究。由于不同的遗传和种族背景,在一个人群中报道的与某些性状相关的基因变异在其他人群中可能不存在,因此需要进行此类研究。单核苷酸多态性(SNP)的基因分型基于多重聚合酶链反应(PCR)和Illumina的新一代测序(NGS)平台。我们最终使用PLINK软件进行了关联研究。我们的结果证实,LIN28基因中的SNP rs34787247、OCT-1基因中的rs74795793和rs9347389,以及ZEB1基因中的rs379202和rs10491080与青春期存在显著关联。基于这一结果,可以合理地得出结论,这些基因影响上海中国女性人群的青春期进程,但其机制仍有待进一步研究探讨。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16c2/7285286/5b609df189cd/IJG2020-1426761.001.jpg

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