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高通量虚拟筛选方法涉及药效团映射、ADME 过滤、分子对接和 MM-GBSA,以鉴定针对 DHODH 和 Cytbc1 复合物的新型双重靶标抑制剂,用于对抗耐药性疟疾。

High-throughput virtual screening approach involving pharmacophore mapping, ADME filtering, molecular docking and MM-GBSA to identify new dual target inhibitors of DHODH and Cytbc1 complex to combat drug resistant malaria.

机构信息

Department of Pharmaceutical Sciences and Technology, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India.

出版信息

J Biomol Struct Dyn. 2021 Sep;39(14):5148-5159. doi: 10.1080/07391102.2020.1784288. Epub 2020 Jun 24.

DOI:10.1080/07391102.2020.1784288
PMID:32579074
Abstract

Emerging cases of drug resistance against Artemisinin combination therapies which are the current and the last line of defense against malaria makes the situation very alarming. Due to the liability of single-target drugs to be more prone to drug resistance, the trend of development of dual or multi-target inhibitors is emerging. Recently, a malaria box molecule, MMV007571 which is a well known new permeability pathways inhibitor was investigated to be also multi-targeting Plasmodium falciparum dihydroorotate dehydrogenase and cytochrome bc1 complex. The aspiration behind this study was to use the information of its pharmacophoric features essential for binding as two of its new targets. In this regard, high throughput virtual screening involving pharmacophore mapping, ADME filtering, molecular docking, and MM-GBSA calculations were carried out. This approach has lead to the identification of two new hits namely DT00V1902 and DT00V1922 which binds with -37.85 and -24.65 kcal/mol of more stable ΔG Bind energy at two targets than the lead molecule, MMV007571. The screened compounds are indicated to be carry improvement in binding potential and pharmacokinetic characters as per in silico studies. The authors propose that DT00V1902 and DT00V1922 can be forwarded for experimental validation and clinical studies for antimalarial chemotherapy. Communicated by Ramaswamy H. Sarma.

摘要

青蒿素联合疗法的耐药性病例不断出现,而青蒿素联合疗法是目前治疗疟疾的最后一道防线,这使得情况非常令人担忧。由于单靶点药物更容易产生耐药性,因此双靶点或多靶点抑制剂的发展趋势正在出现。最近,一种疟疾盒分子 MMV007571,作为一种众所周知的新型通透性途径抑制剂,被发现也可以靶向疟原虫二氢乳清酸脱氢酶和细胞色素 bc1 复合物。这项研究的目的是利用其结合的药效特征信息作为两个新靶点。为此,进行了高通量虚拟筛选,包括药效团映射、ADME 过滤、分子对接和 MM-GBSA 计算。这种方法确定了两个新的命中化合物 DT00V1902 和 DT00V1922,它们与两个靶标结合的ΔG Bind 能量分别为-37.85 和-24.65 kcal/mol,比先导化合物 MMV007571 更稳定。根据计算机研究,筛选出的化合物在结合潜力和药代动力学特征方面显示出改善。作者提出,DT00V1902 和 DT00V1922 可以进一步进行实验验证和临床研究,用于抗疟疾化疗。由 Ramaswamy H. Sarma 传达。

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