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鉴定和表征来源于集胞藻 PCC 6803 的重组同源血红蛋白还原酶。

Identification and characterization of a recombinant cognate hemoglobin reductase from Synechocystis sp. PCC 6803.

机构信息

Department of Biochemistry, University of Delhi South Campus, New Delhi 110021, India.

Department of Biochemistry, University of Delhi South Campus, New Delhi 110021, India.

出版信息

Int J Biol Macromol. 2020 Nov 1;162:1054-1063. doi: 10.1016/j.ijbiomac.2020.06.214. Epub 2020 Jun 27.

Abstract

One popular and relevant proposed function for cyanobacterial hemoglobin (Synechocystis Hb) is anaerobic nitrite reductase in vivo. During such reduction reactions, the hexacoordinated heme iron atom of SynHb is oxidized from the ferrous (Fe) to ferric (Fe) state and prevent damage by limiting the concentration of toxic metabolites such as nitrite. In order to perform these functions in vivo, there must be a mechanism that converts inactive Fe-SynHb back to the active Fe-SynHb to accomplish the nitrite reductase function. Here, we report a cognate reductase protein for Synechocystis hemoglobin which can reduce the Fe-SynHb to Fe-SynHb, thus lending a support to the proposed nitrite reductase function. This reductase is also able to reduce pentacoordinate Hbs such as myoglobin but with lower affinity compared to hexacoordinate SynHb. Insilico model of reductase protein-cyanobacterial hemoglobin complex revealed that the heme active site of Hb faces the catalytic center of the reductase protein and several amino acids in the interface interacts non-covalently thus favoring their interaction. Overall, our in vitro study provides the basic foundation for the understanding of the specific molecular mechanism of action and interaction of the SynHb reductase protein, which need to be investigated in further detail.

摘要

一种流行且相关的提议是,蓝细菌血红蛋白(Synechocystis Hb)的功能是在体内充当厌氧亚硝酸盐还原酶。在这些还原反应中,SynHb 的六配位血红素铁原子从亚铁(Fe)氧化为三价铁(Fe)状态,并通过限制亚硝酸盐等有毒代谢物的浓度来防止损伤。为了在体内执行这些功能,必须有一种机制将无活性的 Fe-SynHb 转化回活性的 Fe-SynHb,以完成亚硝酸盐还原酶的功能。在这里,我们报道了一种与 Synechocystis 血红蛋白相关的还原酶蛋白,它可以将 Fe-SynHb 还原为 Fe-SynHb,从而支持提议的亚硝酸盐还原酶功能。这种还原酶还能够还原五配位的血红蛋白,如肌红蛋白,但与六配位的 SynHb 相比亲和力较低。还原酶蛋白-蓝细菌血红蛋白复合物的计算机模型表明,血红蛋白的血红素活性位点面向还原酶蛋白的催化中心,界面中的几个氨基酸通过非共价相互作用相互作用,从而有利于它们的相互作用。总的来说,我们的体外研究为理解 SynHb 还原酶蛋白的特定作用机制和相互作用提供了基础,这需要进一步详细研究。

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