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纬度和叶绿素 a 密度驱动着海洋表水层浮游微生物区系中碳水化合物活性酶的分布。

Latitude and chlorophyll a density drive the distribution of carbohydrate-active enzymes in the planktonic microbial fraction of the epipelagic zone.

机构信息

Biology Department, San Diego State University, 550 Campanile Drive, San Diego, CA, 92182, USA.

Sydney Institute of Marine Science, 19 Chowder Bay, Mosman, New South Wales, 2088, Australia.

出版信息

Environ Microbiol Rep. 2020 Oct;12(5):473-485. doi: 10.1111/1758-2229.12865. Epub 2020 Aug 4.

Abstract

Microbes drive the majority of the global carbon cycle. The effect of environmental conditions on selecting microbial functional diversity is well established, and recent studies have revealed the effects of geographic distances on selecting the functional components of marine microbial communities. Our study is the first attempt at establishing the effects of environmental factors on driving the marine carbohydrate-active enzyme (CAZyme) distribution. We characterized the diversity of CAZyme genes and investigated the correlations between their distributions and biogeographic parameters (latitude, longitude, distance from the equator, site depth, water depth, chlorophyll density, salinity and temperature). Therefore, we accessed a subset of surface water samples (38 metagenomes) from the Global Ocean Sampling project. Only chlorophyll and latitude altered the distribution patterns of CAZymes, revealing the existence of two latitudinal gradients (positive and negative) of marine CAZyme abundance. Considering the importance of carbohydrates in microbial life, characterization of the spatial patterns of the genetic repertoire involved in carbohydrate metabolism represents an important step in improving our understanding of the metabolic strategies associated with the microbial marine carbon cycle and their effects on the productivity of marine ecosystems.

摘要

微生物驱动着全球碳循环的大部分过程。环境条件对选择微生物功能多样性的影响已得到充分证实,最近的研究揭示了地理距离对选择海洋微生物群落功能成分的影响。我们的研究首次尝试确定环境因素对海洋碳水化合物活性酶(CAZyme)分布的驱动作用。我们对 CAZyme 基因的多样性进行了表征,并研究了它们的分布与生物地理参数(纬度、经度、距赤道的距离、站位深度、水深、叶绿素密度、盐度和温度)之间的相关性。因此,我们从全球海洋采样计划中获取了一组表面水样(38 个宏基因组)。只有叶绿素和纬度改变了 CAZymes 的分布模式,揭示了海洋 CAZyme 丰度存在两个纬度梯度(正和负)。考虑到碳水化合物在微生物生命中的重要性,对参与碳水化合物代谢的遗传库的空间模式进行特征描述是提高我们对与微生物海洋碳循环相关的代谢策略及其对海洋生态系统生产力影响的理解的重要步骤。

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