Department of Medical Genetics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran.
J Gene Med. 2020 Nov;22(11):e3253. doi: 10.1002/jgm.3253. Epub 2020 Aug 3.
The number of reported genes causing non-syndromic autosomal recessive intellectual disability (NS-ARID) is increasing. For example, mutations in the ST3GAL3 gene have been reported to be associated with NS-ARID. In the present study, we aimed to determine the genetic cause of the NS-ARID in a five-generation consanguineous Iranian family.
We subjected four patients with an initial diagnosis of NS-ID in an Iranian family. To identify the possible genetic cause(s), whole-exome sequencing was performed on the proband and Sanger sequencing was applied to investigate co-segregation analysis. Using in silico predictive tools, the possible impacts of the variant on the structure and function of ST3Gal-III were predicted.
The common clinical features were detected in all affected members who were suffering from a severe ID. Using whole-exome sequencing, a novel variant, c.704C>T or p.(Thr235Met), in exon 9 of the ST3GAL3 gene (NM_001270461.2, OMIM# 606494) was identified and verified by Sanger sequencing. This variant is located next to the VS motif of ST3Gal-III, which is a vital part of the catalytical domains.
In the present study, we identified a novel missense variant, c.704C>T or p.(Thr235Met), in the ST3GAL3. To our knowledge, is the third variant in this gene to be associated with NS-ARID. Our findings highlight the need for further investigations into the mechanisms by which variants in ST3GAL3 contribute to neurological dysfunction.
报道的导致常染色体隐性非综合征性智力障碍(NS-ARID)的基因数量正在增加。例如,ST3GAL3 基因的突变已被报道与 NS-ARID 相关。在本研究中,我们旨在确定一个五代近亲伊朗家庭中 NS-ARID 的遗传原因。
我们对一个伊朗家庭中四个初步诊断为 NS-ID 的患者进行了研究。为了确定可能的遗传原因,对先证者进行了全外显子组测序,并应用 Sanger 测序进行共分离分析。使用计算机预测工具,预测了变异对 ST3Gal-III 结构和功能的可能影响。
所有受影响的成员都表现出相同的临床特征,他们都患有严重的智力障碍。使用全外显子组测序,在 ST3GAL3 基因的外显子 9 中发现了一个新的变异 c.704C>T 或 p.(Thr235Met)(NM_001270461.2,OMIM#606494),并通过 Sanger 测序进行了验证。该变异位于 ST3Gal-III 的 VS 基序附近,该基序是催化结构域的重要组成部分。
在本研究中,我们在 ST3GAL3 中鉴定出一个新的错义变异 c.704C>T 或 p.(Thr235Met)。据我们所知,这是该基因与 NS-ARID 相关的第三个变异。我们的研究结果强调了进一步研究 ST3GAL3 变异如何导致神经功能障碍的机制的必要性。