Structural Biology Program, Van Andel Institute, Grand Rapids, MI 49503.
DNA Replication Group, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, W12 0NN London, United Kingdom.
Proc Natl Acad Sci U S A. 2020 Jul 28;117(30):17747-17756. doi: 10.1073/pnas.2006231117. Epub 2020 Jul 15.
DNA replication origins serve as sites of replicative helicase loading. In all eukaryotes, the six-subunit origin recognition complex (Orc1-6; ORC) recognizes the replication origin. During late M-phase of the cell-cycle, Cdc6 binds to ORC and the ORC-Cdc6 complex loads in a multistep reaction and, with the help of Cdt1, the core Mcm2-7 helicase onto DNA. A key intermediate is the ORC-Cdc6-Cdt1-Mcm2-7 (OCCM) complex in which DNA has been already inserted into the central channel of Mcm2-7. Until now, it has been unclear how the origin DNA is guided by ORC-Cdc6 and inserted into the Mcm2-7 hexamer. Here, we truncated the C-terminal winged-helix-domain (WHD) of Mcm6 to slow down the loading reaction, thereby capturing two loading intermediates prior to DNA insertion in budding yeast. In "semi-attached OCCM," the Mcm3 and Mcm7 WHDs latch onto ORC-Cdc6 while the main body of the Mcm2-7 hexamer is not connected. In "pre-insertion OCCM," the main body of Mcm2-7 docks onto ORC-Cdc6, and the origin DNA is bent and positioned adjacent to the open DNA entry gate, poised for insertion, at the Mcm2-Mcm5 interface. We used molecular simulations to reveal the dynamic transition from preloading conformers to the loaded conformers in which the loading of Mcm2-7 on DNA is complete and the DNA entry gate is fully closed. Our work provides multiple molecular insights into a key event of eukaryotic DNA replication.
DNA 复制起点作为复制解旋酶加载的位点。在所有真核生物中,六亚基起始识别复合物(Orc1-6;ORC)识别复制起点。在细胞周期的晚期 M 期,Cdc6 与 ORC 结合,ORC-Cdc6 复合物在多步反应中加载,在 Cdt1 的帮助下,核心 Mcm2-7 解旋酶加载到 DNA 上。一个关键的中间产物是 ORC-Cdc6-Cdt1-Mcm2-7(OCCM)复合物,其中 DNA 已经插入 Mcm2-7 的中央通道。到目前为止,ORC-Cdc6 如何引导起始 DNA 并插入 Mcm2-7 六聚体仍不清楚。在这里,我们截断 Mcm6 的 C 端翼状螺旋结构域(WHD)以减缓加载反应,从而在芽殖酵母中捕获插入 DNA 之前的两个加载中间体。在“半附着 OCCM”中,Mcm3 和 Mcm7 的 WHD 与 ORC-Cdc6 连接,而 Mcm2-7 六聚体的主体没有连接。在“预插入 OCCM”中,Mcm2-7 的主体与 ORC-Cdc6 对接,并且起始 DNA 弯曲并定位在开放的 DNA 入口门附近,准备在 Mcm2-Mcm5 界面处插入。我们使用分子模拟揭示了从预加载构象到加载构象的动态转变,在加载构象中,Mcm2-7 加载到 DNA 上并且 DNA 入口门完全关闭。我们的工作为真核生物 DNA 复制的关键事件提供了多个分子见解。