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基于 GWAS 的 IgA 肾病、膜性肾病和激素敏感型肾病综合征的发现。

GWAS-Based Discoveries in IgA Nephropathy, Membranous Nephropathy, and Steroid-Sensitive Nephrotic Syndrome.

机构信息

Division of Nephrology, Department of Medicine, Vagelos College of Physicians and Surgeons, Columbia University, New York, New York.

出版信息

Clin J Am Soc Nephrol. 2021 Mar 8;16(3):458-466. doi: 10.2215/CJN.14031119. Epub 2020 Jul 17.

DOI:10.2215/CJN.14031119
PMID:32680915
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8011010/
Abstract

Over the past decade, genome-wide association studies (GWAS) have emerged as a powerful tool to understand the genetic basis of complex traits in humans. The GWAS approach has been successfully applied to primary glomerular disorders, providing numerous novel insights into the genetic architecture of IgA nephropathy, membranous nephropathy, and steroid-sensitive nephrotic syndrome. IgA nephropathy appears to have a highly complex polygenic architecture, with nearly 20 genome-wide significant loci of small-to-moderate effects discovered to date. In contrast, the genetic susceptibility to membranous nephropathy and steroid-sensitive nephrotic syndrome appears to be driven by a small number of large-effect loci. The MHC locus on chromosome 6p21 is strongly associated with genetic susceptibility to all major types of immune-mediated glomerulopathies. However, a distinct set of classical HLA alleles is associated with each individual disease type, pinpointing to specific immune mechanisms underlying each of these conditions. Additional insights from the discovery of non-HLA risk loci reinforced the role of innate and adaptive immunity in the pathogenesis of these disorders, and highlighted important susceptibility overlaps between glomerular and other autoimmune and inflammatory conditions. Despite these initial successes, much larger GWAS and sequencing studies are still needed for each individual glomerular disease type. Increased power will be critical to comprehensively test for genetic effects across the full spectrum of allelic frequencies, to detect gene-gene and gene-environment interactions, and to potentially improve the performance of polygenic risk predictors. Moreover, the existing studies are limited mostly to European and East Asian populations, stressing the urgency to expand genetic discovery efforts to more diverse populations worldwide.

摘要

在过去的十年中,全基因组关联研究(GWAS)已成为理解人类复杂特征遗传基础的有力工具。GWAS 方法已成功应用于原发性肾小球疾病,为 IgA 肾病、膜性肾病和激素敏感型肾病综合征的遗传结构提供了许多新的见解。IgA 肾病似乎具有高度复杂的多基因结构,迄今为止已发现近 20 个具有小到中等效应的全基因组显著位点。相比之下,膜性肾病和激素敏感型肾病综合征的遗传易感性似乎是由少数几个大效应位点驱动的。6p21 染色体上的 MHC 基因座与所有主要类型的免疫介导性肾小球病的遗传易感性密切相关。然而,每个单独的疾病类型都与一组独特的经典 HLA 等位基因相关,这些基因指向每种疾病的特定免疫机制。非 HLA 风险基因座的发现提供了更多的见解,进一步证实了固有免疫和适应性免疫在这些疾病发病机制中的作用,并强调了肾小球疾病与其他自身免疫和炎症性疾病之间的重要易感性重叠。尽管取得了这些初步成功,但对于每种原发性肾小球疾病类型,仍需要进行更大规模的 GWAS 和测序研究。增加研究力度对于全面检测全等位基因频率范围内的遗传效应、检测基因-基因和基因-环境相互作用以及提高多基因风险预测器的性能至关重要。此外,现有的研究主要局限于欧洲和东亚人群,强调了迫切需要将遗传发现工作扩展到全球更多样化的人群。