College of Life Sciences, Ritsumeikan University , Kusatsu, Japan.
Institute for Chemical Research, Kyoto University , Kyoto, Japan.
Biosci Biotechnol Biochem. 2020 Nov;84(11):2303-2310. doi: 10.1080/09168451.2020.1797470. Epub 2020 Jul 30.
Enzymes related to β-hydroxyacid dehydrogenases/3-hydroxyisobutyrate dehydrogenases are ubiquitous, but most of them have not been characterized. An uncharacterized protein with moderate sequence similarities to succinic semialdehyde reductase and plant glyoxylate reductases/succinic semialdehyde reductases was found in the genome of JCM20276. The corresponding gene was cloned and expressed in . The gene product was purified and identified as a glyoxylate reductase that exclusively catalyzed the NAD(P)H-dependent reduction of glyoxylate to glycolate. The strict substrate specificity of this enzyme to glyoxylate, the diverged sequence motifs for its binding sites with cofactors and substrates, and its phylogenetic relationship to homologous enzymes suggested that this enzyme represents a novel class of enzymes in the β-hydroxyacid dehydrogenase family. This study may provide an important clue to clarify the metabolism of glyoxylate in bacteria. : GR: glyoxylate reductase; GRHPR: glyoxylate reductase/hydroxypyruvate reductase; HIBADH: 3-hydroxyisobutyrate dehydrogenase; SSA: succinic semialdehyde; SSAR: succinic semialdehyde reductase.
与β-羟基酸脱氢酶/3-羟基异丁酸脱氢酶相关的酶是普遍存在的,但大多数尚未被描述。在 JCM20276 的基因组中发现了一种与琥珀酸半醛还原酶和植物乙醛酸还原酶/琥珀酸半醛还原酶具有中等序列相似性的未描述蛋白。相应的基因被克隆并在大肠杆菌中表达。该基因产物被纯化并鉴定为乙醛酸还原酶,它专门催化 NAD(P)H 依赖性将乙醛酸还原为甘醇酸。该酶对乙醛酸具有严格的底物特异性,其结合位点与辅因子和底物的序列基序不同,以及与同源酶的系统发育关系表明,该酶代表β-羟基酸脱氢酶家族中的一个新酶类。这项研究可能为阐明细菌中乙醛酸的代谢提供重要线索。:GR:乙醛酸还原酶;GRHPR:乙醛酸还原酶/羟丙酮酸还原酶;HIBADH:3-羟基异丁酸脱氢酶;SSA:琥珀酸半醛;SSAR:琥珀酸半醛还原酶。