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来自南极细菌 Bizionia argentinensis JUB59 的新型温和噬菌体的假定长尾纤维受体结合尖端的结构。

Structure of the putative long tail fiber receptor-binding tip of a novel temperate bacteriophage from the Antarctic bacterium Bizionia argentinensis JUB59.

机构信息

Fundación Instituto Leloir, IIBBA-CONICET, Patricias Argentinas 435 (C1405BWE), Buenos Aires, Argentina.

Instituto de Bacteriología y Virología Molecular (IBAVIM), Cátedra de Virología, Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Junín 956 (C1113AAZ), Buenos Aires, Argentina.

出版信息

J Struct Biol. 2020 Oct 1;212(1):107595. doi: 10.1016/j.jsb.2020.107595. Epub 2020 Jul 28.

DOI:10.1016/j.jsb.2020.107595
PMID:32736071
Abstract

Tailed bacteriophages are one of the most widespread biological entities on Earth. Their singular structures, such as spikes or fibers are of special interest given their potential use in a wide range of biotechnological applications. In particular, the long fibers present at the termini of the T4 phage tail have been studied in detail and are important for host recognition and adsorption. Although significant progress has been made in elucidating structural mechanisms of model phages, the high-resolution structural description of the vast population of marine phages is still unexplored. In this context, we present here the crystal structure of C24, a putative receptor-binding tip-like protein from Bizionia argentinensis JUB59, a psychrotolerant bacterium isolated from the marine surface waters of Potter Cove, Antarctica. The structure resembles the receptor-binding tip from the bacteriophage T4 long tail fiber yet showing marked differences in its domain organization, size, sequence identity and metal binding nature. We confirmed the viral origin of C24 by induction experiments using mitomycin C. Our results reveal the presence of a novel uncharacterized prophage in the genome of B. argentinensis JUB59, whose morphology is compatible with the order Caudovirales and that carries the nucleotide sequence of C24 in its genome. This work provides valuable information to expand our current knowledge on the viral machinery prevalent in the oceans.

摘要

长尾噬菌体是地球上分布最广泛的生物实体之一。它们独特的结构,如刺突或纤维,因其在广泛的生物技术应用中的潜在用途而受到特别关注。特别是 T4 噬菌体尾部末端的长纤维已经被详细研究过,对于宿主识别和吸附很重要。尽管在阐明模型噬菌体的结构机制方面已经取得了重大进展,但海洋噬菌体的高分辨率结构描述仍然是未知的。在这方面,我们在这里展示了来自阿根廷 Bizionia argentinensis JUB59 的假定受体结合尖端样蛋白 C24 的晶体结构,Bizionia argentinensis JUB59 是一种从南极洲 Potter 湾海洋表面水中分离出来的耐冷细菌。该结构类似于噬菌体 T4 长尾纤维的受体结合尖端,但在其结构域组织、大小、序列同一性和金属结合性质方面存在明显差异。我们通过使用丝裂霉素 C 诱导实验证实了 C24 的病毒起源。我们的结果揭示了 B. argentinensis JUB59 基因组中存在一种新型未表征的前噬菌体,其形态与尾病毒目一致,并且在其基因组中携带 C24 的核苷酸序列。这项工作提供了有价值的信息,扩展了我们对海洋中流行的病毒机制的现有认识。

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