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B 族链球菌免疫原性菌毛黏附素 BibA N 端螺旋域的新型结构。

Novel structure of the N-terminal helical domain of BibA, a group B streptococcus immunogenic bacterial adhesin.

机构信息

Center for Biophysical Sciences and Engineering, University of Alabama at Birmingham, Birningham, AL 35294, USA.

Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA.

出版信息

Acta Crystallogr D Struct Biol. 2020 Aug 1;76(Pt 8):759-770. doi: 10.1107/S2059798320008116. Epub 2020 Jul 27.

Abstract

BibA, a group B streptococcus (GBS) surface protein, has been shown to protect the pathogen from phagocytic killing by sequestering a complement inhibitor: C4b-binding protein (C4BP). Here, the X-ray crystallographic structure of a GBS BibA fragment (BibA) and a low-resolution small-angle X-ray scattering (SAXS) structure of the full-length N-terminal domain (BibA) are described. The BibA fragment crystal structure displayed a novel and predominantly helical structure. The tertiary arrangement of helices forms four antiparallel three-helix-bundle-motif repeats, with one long helix from a bundle extending into the next. Multiple mutations on recombinant BibA delayed the degradation of the protein, and circular dichroism spectroscopy of BibA suggested a similar secondary-structure composition to that observed in the crystallized BibA fragment. A model was generated for the 92 N-terminal residues (BibA) using structural similarity prediction programs, and a BibA model was generated by combining the coordinates of BibA and BibA. The X-ray structure of BibA and the model of BibA fitted well into the calculated SAXS envelope. One possible binding site for the BibA N-terminal domain was localized to the N-terminal CCP (complement-control protein) domains of the C4BP α-chain, as indicated by the decreased binding of BibA to a ΔCCP1 C4BP α-chain mutant. In summary, it is suggested that the GBS surface protein BibA, which consists of three antiparallel α-helical-bundle motifs, is unique and belongs to a new class of Gram-positive surface adhesins.

摘要

BibA 是 B 群链球菌(GBS)表面蛋白,已被证明通过隔离补体抑制剂 C4b 结合蛋白(C4BP)来保护病原体免受吞噬杀伤。本文描述了 GBS BibA 片段(BibA)的 X 射线晶体结构和全长 N 端结构域(BibA)的低分辨率小角 X 射线散射(SAXS)结构。BibA 片段晶体结构显示出一种新颖的、主要为螺旋的结构。螺旋的三级排列形成了四个反平行的三螺旋束基序重复,其中一个来自束的长螺旋延伸到下一个。对重组 BibA 的多个突变延迟了蛋白的降解,BibA 的圆二色性光谱表明其二级结构组成与结晶 BibA 片段观察到的相似。使用结构相似性预测程序生成了 92 个 N 端残基(BibA)的模型,并通过组合 BibA 和 BibA 的坐标生成了 BibA 的模型。BibA 的 X 射线结构和 BibA 的模型很好地符合计算出的 SAXS 包络。BibA N 端结构域的一个可能的结合位点被定位到 C4BPα 链的 N 端 CCP(补体控制蛋白)结构域,这表明 BibA 与 ΔCCP1 C4BPα 链突变体的结合减少。总之,建议由三个反平行α-螺旋束基序组成的 GBS 表面蛋白 BibA 是独特的,属于新的一类革兰氏阳性表面黏附素。

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