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LRF/ZBTB7A 的保守性突出了其作为造血系统疾病治疗靶点的潜力。

LRF/ZBTB7A conservation accentuates its potential as a therapeutic target for the hematopoietic disorders.

机构信息

Hellenic Open University, School of Science and Technology, Biology Laboratory, Patras, Greece.

University of Ioannina, Faculty of Medicine, Biology Laboratory, Ioannina, Greece.

出版信息

Gene. 2020 Nov 15;760:145020. doi: 10.1016/j.gene.2020.145020. Epub 2020 Aug 2.

Abstract

Conserved sequences across species have always provided valuable insights to improve our understanding on the human genome's entity and the interplay among different loci. Lymphoma/leukemia related factor (LRF) is encoded by ZBTB7A gene and belongs to an evolutionarily conserved family of transcription factors, implicated in vital cellular functions. The present data, demonstrating the wide-spread and the high overlap of the LRF/ZBTB7A recognition sites with genomic segments identified as CpG islands in the human genome, suggest that its binding capacity strongly depends on a specific sequence-encoded feature within CpGs. We have previously shown that de-methylation of the CpG island 326 lying in the ZBTB7A gene promoter is associated with impaired pharmacological induction of fetal hemoglobin in β-type hemoglobinopathies patients. Within this context we aimed to investigate the extent of the LRF/ZBTB7A conservation among primates and mouse genome, focusing our interest also on the CpG island flanking the gene's promoter region, in an effort to further establish its epigenetic regulatory role in human hematopoiesis and pharmacological involvement in hematopoietic disorders. Comparative analysis of the human ZBTB7A nucleotide and amino acid sequences and orthologous sequences among non-human primates and mouse, exhibited high conservation scores. Pathway analysis, clearly indicated that LRF/ZBTB7A influences conserved cellular processes. These data in conjunction with the high levels of expression foremost in hematopoietic tissues, highlighted LRF/ZBTB7A as an essential factor operating indisputably during hematopoiesis.

摘要

跨物种的保守序列一直为我们深入了解人类基因组实体以及不同基因座之间的相互作用提供了有价值的线索。淋巴瘤/白血病相关因子 (LRF) 由 ZBTB7A 基因编码,属于进化上保守的转录因子家族,参与重要的细胞功能。本研究数据表明,LRF/ZBTB7A 识别位点与人类基因组中被鉴定为 CpG 岛的基因组片段广泛重叠,提示其结合能力强烈依赖于 CpG 内特定的序列编码特征。我们之前已经表明,位于 ZBTB7A 基因启动子中的 CpG 岛 326 的去甲基化与β型血红蛋白病患者中胎儿血红蛋白的药物诱导受损有关。在这种情况下,我们旨在研究 LRF/ZBTB7A 在灵长类动物和小鼠基因组中的保守程度,同时关注基因启动子区域侧翼的 CpG 岛,以进一步确定其在人类造血中的表观遗传调控作用以及在造血紊乱中的药物干预作用。人类 ZBTB7A 核苷酸和氨基酸序列与非人类灵长类动物和小鼠的同源序列的比较分析显示出高度的保守评分。途径分析清楚地表明,LRF/ZBTB7A 影响保守的细胞过程。这些数据加上在造血组织中首先表达的高水平,突出了 LRF/ZBTB7A 作为在造血过程中不可争议地发挥作用的重要因素。

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