Laboratoire de Neurocardiologie, EA4612, Université Lyon 1, Lyon, F-69003, France; INSERM, ADR Lyon, Lyon, F-69003, France.
CNRS UMR 5123, Campus de la Doua, Université Claude Bernard Lyon 1, 69622, Villeurbanne, France.
Prog Biophys Mol Biol. 2020 Nov;157:40-53. doi: 10.1016/j.pbiomolbio.2020.06.005. Epub 2020 Aug 10.
In-silico models of cardiac myocytes allow simulating experiments in numbers on series of myocytes as well as on large populations of myocytes assembled in 3D structures. The simulated myocyte populations should have realistic values and statistical dispersions of biophysical parameters such as myocyte dimensions and volume and areas of the peripheral membrane and transverse-axial tubular system (TATS). Dependencies among these variables also have to be taken into account. In this work, we propose a quantitative representation of the changes in the fraction of membrane area in the TATS that integrates published dependencies with body weight (age) and size of rat ventricular cardiac myocytes while respecting the above constraints. Imposing a constant total membrane area-to-volume ratio appears to account for the increase of this fraction with myocyte size (i.e.: volume) within a given age group. The agreement of our results with published data was discussed and reasons for discrepancies were analysed. On the basis of our framework, strategies are proposed for minimizing the influence of non-random dispersion related to myocyte volume on measurements of the area of TATS and surface membrane compartments and of ionic current densities. The next step will be to quantitatively compare these strategies by evaluating the impact of myocyte morphological parameters and their dependencies, sample size, biases and errors, on the output of experiments.
心脏肌细胞的计算机模型允许在一系列肌细胞以及组装在 3D 结构中的大量肌细胞上模拟实验。模拟的肌细胞群体应该具有真实的值和生物物理参数的统计离散度,如肌细胞的尺寸和体积以及外周膜和横向轴管状系统 (TATS) 的面积。这些变量之间的依赖关系也必须考虑在内。在这项工作中,我们提出了一种定量表示 TATS 中膜面积分数变化的方法,该方法将已发表的与体重(年龄)和大鼠心室心肌细胞大小相关的依赖性与上述约束条件结合起来。施加一个恒定的总膜面积与体积比,似乎可以解释在给定年龄组内,该分数随肌细胞大小(即体积)的增加而增加。我们还讨论了与已发表数据的一致性,并分析了差异的原因。在此框架的基础上,提出了一些策略来最小化与肌细胞体积相关的非随机分散对 TATS 面积和表面膜区室以及离子电流密度测量的影响。下一步将通过评估肌细胞形态参数及其依赖性、样本量、偏差和误差对实验输出的影响,来定量比较这些策略。