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T偶数噬菌体中的RNA剪接

RNA splicing in the T-even bacteriophage.

作者信息

Chu F K, Maley G F, Maley F

机构信息

Wadsworth Center for Laboratories and Research, New York State Department of Health, Albany 12201.

出版信息

FASEB J. 1988 Mar 1;2(3):216-23. doi: 10.1096/fasebj.2.3.3280375.

Abstract

Group 1 introns, first demonstrated in the nuclear large rRNA of Tetrahymena thermophila and subsequently in many yeast, fungal mitochondrial, and chloroplast precursor RNAs, are capable of intron excision and exon ligation in vitro, although this process occurs much more rapidly in vivo. The discovery and characterization of a similar intron in the T4 phage thymidylate synthase gene (td) led to the finding of additional group 1 introns in other T4 genes and in genes of the related T2 and T6 phages. Because protein factors are not required in the splicing of group 1 introns in vitro, it has been postulated that the precursor RNA can assume a critical conformation enabling it to undergo site-specific autocatalytic cleavage and ligation (self-splicing). By means of site-directed mutation, it has been shown unequivocally that several sequence elements in the Tetrahymena rRNA intron are involved in the formation of base-paired stem structures that are essential for the self-splicing process. These sequence elements have been demonstrated in other eukaryotic group 1 introns, as well as in the td intron. In this brief review we shall describe the biochemical and structural properties of the td intron in relation to other newly found phage introns. The interesting implications arising from these revelations will also be discussed.

摘要

第1类内含子最初在嗜热栖热放线菌的核大核糖体RNA中被发现,随后在许多酵母、真菌线粒体和叶绿体前体RNA中也被发现。这类内含子能够在体外进行内含子切除和外显子连接,尽管这一过程在体内发生得更快。在T4噬菌体胸苷酸合成酶基因(td)中发现并鉴定出类似的内含子后,又在其他T4基因以及相关的T2和T6噬菌体基因中发现了更多第1类内含子。由于体外第1类内含子的剪接不需要蛋白质因子,因此推测前体RNA可以呈现一种关键构象,使其能够进行位点特异性的自催化切割和连接(自我剪接)。通过定点突变,已经明确表明嗜热栖热放线菌核糖体RNA内含子中的几个序列元件参与了碱基配对茎结构的形成,而这些结构对于自我剪接过程至关重要。这些序列元件在其他真核生物第1类内含子以及td内含子中也得到了证实。在这篇简短的综述中,我们将描述td内含子与其他新发现的噬菌体内含子相关的生化和结构特性。我们还将讨论这些发现所带来的有趣启示。

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