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阳性血培养延迟分析对短期培养后进行基质辅助激光解吸电离飞行时间质谱分析性能的影响。

The impact of delayed analysis of positive blood cultures on the performance of short-term culture followed by MALDI-TOF MS.

作者信息

Johnsson Alexander T A, Wong Alicia Y W, Özenci Volkan

机构信息

Department of Clinical Microbiology, Karolinska University Hospital Stockholm, Sweden.

Department of Clinical Microbiology, Karolinska University Hospital Stockholm, Sweden; Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden.

出版信息

J Microbiol Methods. 2020 Oct;177:106027. doi: 10.1016/j.mimet.2020.106027. Epub 2020 Aug 15.

Abstract

BACKGROUND

Short-term culture followed by MALDI-TOF MS is one of the most widely used methods for fast identification of microorganisms from blood cultures. The method identifies the vast majority of bloodstream infection pathogens in 2-6 h after positive blood culture. Transport time of blood culture bottles to laboratories is a major problem affecting total turnaround time. Therefore, many central laboratories establish satellite blood culture systems in other clinics and hospitals to allow blood culture bottles to be incubated immediately after sampling. However, positive blood culture bottles still need to be transported to the clinical microbiology laboratory for analysis. The aim of this study was to investigate how delayed analysis of positive blood culture bottles would affect the short-term culture followed by MALDI-TOF MS method.

MATERIALS/METHODS: To simulate the effect of transportation and delayed analysis of blood culture bottles, 51 simulated blood culture bottles were incubated for 0, 2, 4 and 24 h at room temperature. After each time interval, a 2 to 4 h short-term culture followed by MALDI-TOF MS was performed. In addition, 257 prospective clinical positive blood culture bottles were analysed with the same method after a 24 h incubation at room temperature.

RESULTS

In simulated samples, all (120/120) Gram-negative bacteria and 77/84 (91.6%) Gram-positive bacteria were accurately identified at species-level after a 2 h short-term culture, regardless of the duration of simulated transport time. In the clinical samples, 100/116 (86.2%) Gram-negative, and 44/141 (31.2%) Gram-positive bacteria were accurately identified at species-level after a 2 h short-term culture. After contaminants were excluded, 39/71 (54.9%) Gram-positive bacteria could be identified after 2 h. After a 4 h short-term culture, 112/116 (96.6%) Gram-negative, and 108/141 (76.6%) Gram-positive bacteria were accurately identified at species-level. Of the clinically relevant Gram-positive bacteria, 68/71 (95.8%) were identified at species-level after 4 h.

CONCLUSIONS

Short-term culture followed by MALDI-TOF MS can provide fast and accurate results for identification of clinically relevant bacteria, despite long transportation times from satellite laboratories. The present data shows that the method can be used for identification of microorganisms from positive blood cultures transported from satellite blood culture systems.

摘要

背景

短期培养后进行基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)分析是从血培养物中快速鉴定微生物最广泛使用的方法之一。该方法能在血培养阳性后的2至6小时内鉴定出绝大多数血流感染病原体。血培养瓶运送到实验室的时间是影响总周转时间的一个主要问题。因此,许多中心实验室在其他诊所和医院建立卫星血培养系统,以便血培养瓶在采样后立即进行培养。然而,阳性血培养瓶仍需运送到临床微生物实验室进行分析。本研究的目的是调查阳性血培养瓶的分析延迟对短期培养后进行MALDI-TOF MS方法有何影响。

材料/方法:为模拟血培养瓶运输及分析延迟的影响,将51个模拟血培养瓶在室温下分别孵育0、2、4和24小时。在每个时间间隔后,进行2至4小时的短期培养,然后进行MALDI-TOF MS分析。此外,对257个前瞻性临床阳性血培养瓶在室温下孵育24小时后用相同方法进行分析。

结果

在模拟样本中,无论模拟运输时间长短,所有(120/120)革兰氏阴性菌和84个中的77个(91.6%)革兰氏阳性菌在2小时短期培养后均能在种水平上准确鉴定。在临床样本中,116个中的100个(86.2%)革兰氏阴性菌和141个中的44个(31.2%)革兰氏阳性菌在2小时短期培养后能在种水平上准确鉴定。排除污染物后,2小时后可鉴定出71个中的39个(54.9%)革兰氏阳性菌。4小时短期培养后,116个中的112个(96.6%)革兰氏阴性菌和141个中的108个(76.6%)革兰氏阳性菌在种水平上准确鉴定。在临床相关革兰氏阳性菌中,4小时后71个中的68个(95.8%)在种水平上被鉴定出来。

结论

尽管从卫星实验室运输时间较长,但短期培养后进行MALDI-TOF MS分析可为临床相关细菌的鉴定提供快速准确的结果。目前的数据表明,该方法可用于鉴定从卫星血培养系统运输来的阳性血培养物中的微生物。

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