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基于计算机的 SARS-CoV-2 主蛋白酶结构抑制饮食成分评估。

An in-silico evaluation of dietary components for structural inhibition of SARS-Cov-2 main protease.

机构信息

Department of Biotechnology Engineering, Institute of Engineering and Technology, Bundelkhand University, Jhansi, India.

Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology, New Delhi, India.

出版信息

J Biomol Struct Dyn. 2022 Jan;40(1):136-142. doi: 10.1080/07391102.2020.1809522. Epub 2020 Aug 18.

Abstract

The main protease (M) of SARS-CoV-2 is responsible for the cleavage of viral replicase polyproteins 1a and 1ab into their mature form and is highly specific and exclusive in its activity. Many studies have targeted this enzyme by small molecule inhibitors to develop therapeutics against the highly infectious disease Covid-19. Our diet contains many natural antioxidants which along with providing support for proper growth and functioning of the body, pose additional health benefits. Present in-silico analysis depicted that natural antioxidants like sesamin, ellagic acid, capsaisin, and epicatechin along with galangin, exhibited significant binding at the catalytic site of the M enzyme. They interacted with excellent efficiency with the chief active site residue Cys145 and thus seem to possess the remarkable potential to act as drug candidates for the treatment of Covid-19. Such dietary compounds can be easily administered orally with least toxicity related concern and thus yell for urgent exhaustive research to develop into efficient therapies.Communicated by Ramaswamy H. Sarma.

摘要

新型冠状病毒的主要蛋白酶(M)负责将病毒复制酶多蛋白 1a 和 1ab 切割成成熟形式,其活性具有高度的特异性和专一性。许多研究通过小分子抑制剂靶向这种酶,以开发针对高度传染性疾病 COVID-19 的治疗方法。我们的饮食中含有许多天然抗氧化剂,这些抗氧化剂除了为身体的正常生长和功能提供支持外,还具有额外的健康益处。目前的计算机分析表明,天然抗氧化剂,如芝麻素、鞣花酸、辣椒素和表儿茶素,以及姜黄素,在 M 酶的催化部位表现出显著的结合活性。它们与主要的活性位点残基 Cys145 以优异的效率相互作用,因此似乎具有作为 COVID-19 治疗药物候选物的显著潜力。这些饮食化合物可以很容易地通过口服给药,毒性相关问题最小,因此迫切需要进行广泛的研究,以开发出有效的治疗方法。通讯作者为 Ramaswamy H. Sarma。

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