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一氧化碳血红蛋白光解离后的时间分辨光谱学与结构动力学

Time-resolved optical spectroscopy and structural dynamics following photodissociation of carbonmonoxyhemoglobin.

作者信息

Murray L P, Hofrichter J, Henry E R, Eaton W A

机构信息

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, MD 20892.

出版信息

Biophys Chem. 1988 Feb;29(1-2):63-76. doi: 10.1016/0301-4622(88)87025-x.

Abstract

A summary is presented of our current understanding of the kinetics of ligand rebinding and conformational changes at room temperature following photodissociation of the carbon monoxide complex of hemoglobin with pulsed lasers. The events which occur subsequent to excitation have been followed over 12 decades in time, from about 100 fs to the completion of ligand rebinding at about 100 ms. Experiments with picosecond and subpicosecond lasers by others, together with molecular dynamics simulations, indicate that by 1 ns the deoxyhemoglobin photoproduct is in a thermally equilibrated ground electronic state, so that subsequent processes are unaffected by the initial laser excitation. The principal results have been obtained from time-resolved optical absorption spectroscopy using a sensitive nanosecond laser spectrometer. Five relaxations have been observed which are interpreted as geminate rebinding at about 50 ns that competes with motion of the ligand away from the heme which produces a tertiary conformational change, a second tertiary conformational change at 0.5-1 microseconds, transition from the R to T quaternary structure at about 20 microseconds, and overall bimolecular rebinding of ligands from the solvent to the R and T quaternary structures at about 200 microseconds and 10 ms. Assuming that the dissociation pathway in photolysis experiments is the reverse of the association pathway, we find that for the R state there is a 40% probability that the ligand will bind to the heme after entering the protein, and a 60% probability that it will return to the solvent. Studies on the alpha-subunit of an iron-cobalt hybrid hemoglobin indicate that carbon monoxide enters the protein at the same rate for both R and T quaternary structures. For the alpha-subunit in the T state the probability of binding after entry is much lower, and the ligand returns to the solvent more than 99% of the time, accounting for the 60-fold overall lower association rate. This decreased probability of binding results from a decreased rate of binding to the heme from within the protein, and not an increased rate of return to the solvent. There are still unresolved problems on the basic structural description of carbon monoxide binding and dissociation, particularly the functional significance of the tertiary relations in both the R and T states, and the precise number of kinetic barriers within the protein.

摘要

本文总结了我们目前对血红蛋白一氧化碳复合物在室温下经脉冲激光光解离后配体重新结合动力学和构象变化的理解。从约100飞秒到约100毫秒配体重新结合完成,激发后发生的事件在12个数量级的时间范围内被追踪。其他人用皮秒和亚皮秒激光进行的实验以及分子动力学模拟表明,到1纳秒时,脱氧血红蛋白光产物处于热平衡的基态电子态,因此后续过程不受初始激光激发的影响。主要结果是通过使用灵敏的纳秒激光光谱仪的时间分辨光吸收光谱法获得的。观察到了五种弛豫过程,它们被解释为约50纳秒时的双分子重新结合,这与配体远离血红素的运动相竞争,后者会产生三级构象变化;在0.5 - 1微秒时发生第二次三级构象变化;在约20微秒时从R四级结构转变为T四级结构;以及在约200微秒和10毫秒时配体从溶剂到R和T四级结构的整体双分子重新结合。假设光解实验中的解离途径与结合途径相反,我们发现对于R态,配体进入蛋白质后与血红素结合的概率为40%,返回溶剂的概率为60%。对铁 - 钴杂合血红蛋白α亚基的研究表明,一氧化碳进入蛋白质的速率对于R和T四级结构是相同的。对于处于T态的α亚基,进入后结合的概率要低得多,配体99%以上的时间会返回溶剂,这导致整体结合速率降低了60倍。这种结合概率的降低是由于从蛋白质内部与血红素结合的速率降低,而不是返回溶剂的速率增加。关于一氧化碳结合和解离的基本结构描述仍有未解决的问题,特别是R和T态中三级关系的功能意义,以及蛋白质内动力学障碍的确切数量。

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