Shanghai Key Lab of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, PR China.
Research Center of Analysis and Test, School of Chemistry & Molecular Engineering, East China University of Science and Technology, Shanghai 200237, PR China.
J Agric Food Chem. 2020 Sep 30;68(39):10975-10983. doi: 10.1021/acs.jafc.0c04908. Epub 2020 Sep 9.
Pyraclostrobin (PYR) is a commonly used strobilurin fungicide, which inhibits mitochondrial respiration at the ubiquinol oxidation center site of the cytochrome bc1 complex. Little information is available regarding the crystal structure of PYR on its fungicidal effect. In this study, the crystal structures of eight PYRs (PYR-A to H) from different sources are determined by using high-resolution X-ray powder diffraction (XRPD) and model construction with the Pawley refinement module. The effects of PYRs on mycelium growth, the kinetics of mycelial growth, conidial germination, and tube elongation of conidia of from tomato are compared. The level of organic acids in the mitochondrial tricarboxylic acid cycle of PYR-treated is analyzed. The results show that PYR-A to PYR-H have their own unique character of XRPD patterns, but the crystal morphology of eight PYRs presents in the triclinic crystal system and space group 1̅. PYR-D with the eclipsed conformation and rational edge angles α (72.599°) and β (98.612°) in the crystal cell shows the highest inhibitory effect against mycelium growth with EC as 3.383 μg mL, the best time-dependent effects on the mycelium growth kinetics, and the strongest inhibition on tube elongation of conidia, whereas PYR-E with anticonformation is the worst. Moreover, a significant accumulation of fumarate, malate, and oxalate in the PYR-D-treated mycelium is observed. These findings reinforce the need for a definite crystal structure of PYR to limit usage and mitigate future selection pressure for gray mold management.
唑菌酯(PYR)是一种常用的苯并咪唑类杀菌剂,它在细胞色素 bc1 复合物的泛醌氧化中心抑制线粒体呼吸。关于唑菌酯对其杀菌效果的晶体结构的信息很少。在这项研究中,使用高分辨率 X 射线粉末衍射(XRPD)和 Pawley 精修模块的模型构建,确定了来自不同来源的八种唑菌酯(PYR-A 至 H)的晶体结构。比较了唑菌酯对番茄灰霉菌菌丝生长、菌丝生长动力学、分生孢子萌发和分生孢子管伸长的影响。分析了唑菌酯处理的灰霉菌线粒体三羧酸循环中的有机酸水平。结果表明,PYR-A 至 PYR-H 具有各自独特的 XRPD 图谱特征,但这 8 种唑菌酯的晶体形态呈斜方晶系和 1̅空间群。在晶体胞中具有重叠构象和合理的边角α(72.599°)和β(98.612°)的 PYR-D 对菌丝生长表现出最高的抑制作用,EC 为 3.383 μg mL,对菌丝生长动力学具有最佳的时间依赖性效应,对分生孢子管伸长的抑制作用最强,而具有反式构象的 PYR-E 则最差。此外,在 PYR-D 处理的菌丝中观察到富马酸、苹果酸和草酸盐的显著积累。这些发现强调了需要确定唑菌酯的明确晶体结构,以限制其使用并减轻未来对灰霉病管理的选择压力。