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使用T4 DNA聚合酶进行位点特异性寡核苷酸定向诱变。

Site-specific oligonucleotide-directed mutagenesis using T4 DNA polymerase.

作者信息

Chang G J, Johnson B J, Trent D W

机构信息

Division of Vector-Borne Viral Diseases, Centers for Disease Control, Fort Collins, CO 80522.

出版信息

DNA. 1988 Apr;7(3):211-7. doi: 10.1089/dna.1988.7.211.

DOI:10.1089/dna.1988.7.211
PMID:3286164
Abstract

A simple and efficient mutagenesis procedure is described which uses both the 3'----5' exonuclease and 5'----3' polymerase activities of T4 DNA polymerase. Different types of mutation-deletion, insertion, and substitution-can be introduced into the DNA in a single reaction. The technique uses recombinant M13 single-stranded DNA and two complementary DNA oligonucleotides to target and control the extent of deletions catalyzed by T4 DNA polymerase. The second oligonucleotide not only directs ligation, but also serves as a template for insertion or substitution of nucleotides by T4 polymerase. Mutant phages in a genetically pure form can be obtained at high efficiency, allowing their characterization directly by nucleotide sequencing without prior enrichment, plaque purification, and screening. We tested the versatility of this method by manipulating five regions of cDNA encoding the structural proteins of eastern equine encephalitis virus.

摘要

本文描述了一种简单高效的诱变程序,该程序利用了T4 DNA聚合酶的3'→5'核酸外切酶和5'→3'聚合酶活性。不同类型的突变——缺失、插入和替换——可在单一反应中引入到DNA中。该技术使用重组M13单链DNA和两个互补的DNA寡核苷酸来靶向并控制T4 DNA聚合酶催化的缺失范围。第二个寡核苷酸不仅指导连接,还作为T4聚合酶插入或替换核苷酸的模板。可以高效获得基因纯合形式的突变噬菌体,无需事先富集、噬菌斑纯化和筛选,即可直接通过核苷酸测序对其进行表征。我们通过操作编码东部马脑炎病毒结构蛋白的cDNA的五个区域,测试了该方法的通用性。

相似文献

1
Site-specific oligonucleotide-directed mutagenesis using T4 DNA polymerase.使用T4 DNA聚合酶进行位点特异性寡核苷酸定向诱变。
DNA. 1988 Apr;7(3):211-7. doi: 10.1089/dna.1988.7.211.
2
Oligonucleotide-directed mutagenesis using M13-derived vectors: an efficient and general procedure for the production of point mutations in any fragment of DNA.使用M13衍生载体的寡核苷酸定向诱变:在任何DNA片段中产生点突变的高效通用方法。
Nucleic Acids Res. 1982 Oct 25;10(20):6487-500. doi: 10.1093/nar/10.20.6487.
3
Site-directed mutagenesis with Escherichia coli DNA polymerase III holoenzyme.
Gene. 1988;62(1):135-9. doi: 10.1016/0378-1119(88)90587-2.
4
Oligonucleotide-directed mutagenesis: a simple method using two oligonucleotide primers and a single-stranded DNA template.寡核苷酸定向诱变:一种使用两条寡核苷酸引物和单链DNA模板的简单方法。
DNA. 1984 Dec;3(6):479-88. doi: 10.1089/dna.1.1984.3.479.
5
Site specific mutagenesis: insertion of single noncomplementary nucleotides at specified sites by error-directed DNA polymerization.位点特异性诱变:通过错向DNA聚合在特定位点插入单个非互补核苷酸。
Nucleic Acids Res. 1984 Aug 24;12(16):6615-28. doi: 10.1093/nar/12.16.6615.
6
Oligonucleotide-directed mutagenesis: a simple method using two oligonucleotide primers and a single-stranded DNA template.寡核苷酸定向诱变:一种使用两个寡核苷酸引物和单链DNA模板的简单方法。
Methods Enzymol. 1987;154:329-50. doi: 10.1016/0076-6879(87)54083-6.
7
A method for unidirectional deletion mutagenesis with application to nucleotide sequencing and preparation of gene fusions.一种用于单向缺失诱变的方法及其在核苷酸测序和基因融合制备中的应用。
Gene. 1986;49(1):119-28. doi: 10.1016/0378-1119(86)90391-4.
8
Simplified in vitro synthesis of mutated RNA molecules. An oligonucleotide promoter determines the initiation site of T7RNA polymerase on ss M13 phage DNA.
FEBS Lett. 1987 Feb 23;212(2):271-5. doi: 10.1016/0014-5793(87)81359-5.
9
DNA polymerization in the absence of exonucleolytic proofreading: in vivo and in vitro studies.无核酸外切酶校对情况下的DNA聚合:体内和体外研究
Proc Natl Acad Sci U S A. 1991 Mar 15;88(6):2417-21. doi: 10.1073/pnas.88.6.2417.
10
[Variants of phage M13 DNA containing a fragment of the beta-galactosidase gene--a convenient mutation system for the study of oligonucleotide-directed mutagenesis].[含有β-半乳糖苷酶基因片段的噬菌体M13 DNA变体——用于寡核苷酸定向诱变研究的便捷突变系统]
Bioorg Khim. 1986 Dec;12(12):1612-24.

引用本文的文献

1
Attenuation of Venezuelan equine encephalitis virus strain TC-83 is encoded by the 5'-noncoding region and the E2 envelope glycoprotein.委内瑞拉马脑炎病毒株TC-83的减毒由5'-非编码区和E2包膜糖蛋白编码。
J Virol. 1993 Mar;67(3):1269-77. doi: 10.1128/JVI.67.3.1269-1277.1993.
2
Ordered deletions for DNA sequencing and in vitro mutagenesis by polymerase extension and exonuclease III gapping of circular templates.通过聚合酶延伸和环状模板的核酸外切酶III缺口进行DNA测序和体外诱变的有序缺失。
Nucleic Acids Res. 1990 May 25;18(10):2961-6. doi: 10.1093/nar/18.10.2961.