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COVID-19 与 SARS-CoV-2 进入宿主细胞相关蛋白的遗传变异。

COVID-19 and Genetic Variants of Protein Involved in the SARS-CoV-2 Entry into the Host Cells.

机构信息

Department of Biomedicine and Prevention, Tor Vergata University Hospital, 00133 Rome, Italy.

Laboratory of Medical Genetics, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.

出版信息

Genes (Basel). 2020 Aug 27;11(9):1010. doi: 10.3390/genes11091010.

Abstract

The recent global COVID-19 public health emergency is caused by SARS-CoV-2 infections and can manifest extremely variable clinical symptoms. Host human genetic variability could influence susceptibility and response to infection. It is known that ACE2 acts as a receptor for this pathogen, but the viral entry into the target cell also depends on other proteins. The aim of this study was to investigate the variability of genes coding for these proteins involved in the SARS-CoV-2 entry into the cells. We analyzed 131 COVID-19 patients by exome sequencing and examined the genetic variants of and genes. In total we identified seventeen variants. In gene, we observed a missense variant (c.893G>A) statistically more frequent compared to the EUR GnomAD reference population and a missense mutation (c.1906A>G) not found in the GnomAD database. In gene, we observed a significant difference in the frequency of c.331G>A, c.23G>T, and c.589G>A variant alleles in COVID-19 patients, compared to the corresponding allelic frequency in GnomAD. Genetic variants in these genes could influence the entry of the SARS-CoV-2. These data also support the hypothesis that host genetic variability may contribute to the variability in infection susceptibility and severity.

摘要

最近的全球 COVID-19 公共卫生紧急事件是由 SARS-CoV-2 感染引起的,可表现出极其不同的临床症状。宿主人类遗传变异性可能会影响对感染的易感性和反应。众所周知,ACE2 是该病原体的受体,但病毒进入靶细胞也依赖于其他蛋白质。本研究旨在研究编码这些参与 SARS-CoV-2 进入细胞的蛋白质的基因的变异性。我们通过外显子组测序分析了 131 名 COVID-19 患者,并检查了 和 基因的遗传变异。总共我们确定了十七个变体。在 基因中,我们观察到与 EUR GnomAD 参考人群相比,一个错义变异(c.893G>A)的统计学上更频繁,而在 GnomAD 数据库中未发现的一个错义突变(c.1906A>G)。在 基因中,我们观察到与 GnomAD 中的相应等位基因频率相比,COVID-19 患者中 c.331G>A、c.23G>T 和 c.589G>A 变体等位基因的频率存在显著差异。这些基因中的遗传变异可能会影响 SARS-CoV-2 的进入。这些数据还支持宿主遗传变异性可能导致感染易感性和严重程度的变异性的假设。

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本文引用的文献

2
CD147-spike protein is a novel route for SARS-CoV-2 infection to host cells.
Signal Transduct Target Ther. 2020 Dec 4;5(1):283. doi: 10.1038/s41392-020-00426-x.
3
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4
and variants and expression as candidates to sex and country differences in COVID-19 severity in Italy.
Aging (Albany NY). 2020 Jun 5;12(11):10087-10098. doi: 10.18632/aging.103415.
5
The mutational constraint spectrum quantified from variation in 141,456 humans.
Nature. 2020 May;581(7809):434-443. doi: 10.1038/s41586-020-2308-7. Epub 2020 May 27.
6
An outbreak of severe Kawasaki-like disease at the Italian epicentre of the SARS-CoV-2 epidemic: an observational cohort study.
Lancet. 2020 Jun 6;395(10239):1771-1778. doi: 10.1016/S0140-6736(20)31103-X. Epub 2020 May 13.
7
Cell entry mechanisms of SARS-CoV-2.
Proc Natl Acad Sci U S A. 2020 May 26;117(21):11727-11734. doi: 10.1073/pnas.2003138117. Epub 2020 May 6.
8
CD147 as a Target for COVID-19 Treatment: Suggested Effects of Azithromycin and Stem Cell Engagement.
Stem Cell Rev Rep. 2020 Jun;16(3):434-440. doi: 10.1007/s12015-020-09976-7.
9
Coronavirus membrane fusion mechanism offers a potential target for antiviral development.
Antiviral Res. 2020 Jun;178:104792. doi: 10.1016/j.antiviral.2020.104792. Epub 2020 Apr 6.
10
Insight into 2019 novel coronavirus - An updated interim review and lessons from SARS-CoV and MERS-CoV.
Int J Infect Dis. 2020 May;94:119-124. doi: 10.1016/j.ijid.2020.03.071. Epub 2020 Apr 1.

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