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一种新型真菌病毒引发真菌转录重排,并刺激巨噬细胞产生β干扰素。

A Novel Mycovirus Evokes Transcriptional Rewiring in the Fungus and Stimulates Beta Interferon Production in Macrophages.

机构信息

Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, USA.

Section of Immunology, Vetsuisse Faculty, University of Zurich, Zurich, Switzerland.

出版信息

mBio. 2020 Sep 1;11(5):e01534-20. doi: 10.1128/mBio.01534-20.

Abstract

Mycoviruses infect fungi, and while most persist asymptomatically, there are examples of mycoviruses having both beneficial and detrimental effects on their host. Virus-infected and strains exhibit a killer phenotype conferring a growth advantage over uninfected strains and other competing yeast species, whereas hypovirus-infected displays defects in growth, sporulation, and virulence. In this study, we identify a double-stranded RNA (dsRNA) mycovirus in five species. Sequence analysis reveals it to be a totivirus with two dsRNA segments: a larger 4.5-kb segment with genes encoding components for viral replication and maintenance, and a smaller 1.4-kb segment encoding a novel protein. Furthermore, transcriptome sequencing (RNA-seq) of virus-infected versus virus-cured revealed an upregulation of dozens of ribosomal components in the cell, suggesting the virus modifies the transcriptional and translational landscapes of the cell. Given that is the most abundant fungus on human skin, we assessed the impact of the mycovirus in a murine epicutaneous infection model. Although infection with virus-infected strains was not associated with an increased inflammatory response, we did observe enhanced skin colonization in one of two virus-infected strains. Noteworthy, beta interferon expression was significantly upregulated in bone marrow-derived macrophages when challenged with virus-infected, compared to virus-cured, , suggesting that the presence of the virus can induce an immunological response. Although many recent studies have illuminated how widespread mycoviruses are, there are relatively few in-depth studies about their impact on disease caused by the host fungus. We describe here a novel mycovirus in and its possible implications in pathogenicity. species represent the most common fungal inhabitant of the mammalian skin microbiome and are natural skin commensal flora. However, these fungi are also associated with a variety of clinical skin disorders. Recent studies have reported associations of with Crohn's disease and pancreatic cancer, further implicating this fungal genus in inflammatory and neoplastic disease states. Because has lost genes involved in RNA interference (RNAi), we hypothesized could harbor dsRNA mycoviruses. Indeed, we identified a novel mycovirus of the totivirus family in several species and characterized the MsMV1 mycovirus of We found conditions that lead to curing of the virus and analyzed isogenic virus-infected/virus-cured strains to determine MsMV1 genetic and pathogenic impacts. MsMV1 induces a strong overexpression of transcription factors and ribosomal genes, while downregulating cellular metabolism. Moreover, MsMV1 induced a significantly higher level of beta interferon expression in cultured macrophages. This study sheds light on the mechanisms of pathogenicity of , focusing on a previously unidentified novel mycovirus.

摘要

真菌病毒感染真菌,虽然大多数真菌病毒无症状地持续存在,但也有一些真菌病毒对其宿主有有益和有害的影响。病毒感染和菌株表现出杀伤表型,相对于未感染菌株和其他竞争酵母物种具有生长优势,而类病毒感染的菌株则表现出生长、孢子形成和毒力缺陷。在这项研究中,我们在五个酿酒酵母物种中鉴定出一种双链 RNA (dsRNA) 真菌病毒。序列分析表明,它是一种 totivirus,具有两个 dsRNA 片段:一个较大的 4.5kb 片段,具有编码病毒复制和维持所需成分的基因,和一个较小的 1.4kb 片段,编码一种新型蛋白。此外,病毒感染与病毒清除的酿酒酵母的转录组测序(RNA-seq)显示,细胞中数十种核糖体成分的表达上调,表明病毒改变了细胞的转录和翻译景观。鉴于酿酒酵母是人类皮肤上最丰富的真菌,我们在一种小鼠表皮感染模型中评估了真菌病毒的影响。尽管感染病毒感染的菌株不会导致炎症反应增加,但我们确实观察到两种病毒感染的酿酒酵母菌株中的一种菌株的皮肤定植增强。值得注意的是,与病毒清除的酿酒酵母相比,用病毒感染的酿酒酵母挑战骨髓来源的巨噬细胞时,β干扰素的表达显著上调,这表明病毒的存在可以诱导免疫反应。尽管最近的许多研究阐明了真菌病毒的广泛存在,但关于它们对宿主真菌引起的疾病的影响的深入研究相对较少。我们在这里描述了一种新型的酿酒酵母真菌病毒及其在致病性中的可能意义。酿酒酵母物种是哺乳动物皮肤微生物组中最常见的真菌寄居者,也是天然的皮肤共生菌群。然而,这些真菌也与多种临床皮肤疾病有关。最近的研究报告了与克罗恩病和胰腺癌有关的酿酒酵母,进一步表明这个真菌属与炎症和肿瘤疾病状态有关。由于酿酒酵母已经失去了与 RNA 干扰(RNAi)相关的基因,我们假设酿酒酵母可能含有 dsRNA 真菌病毒。事实上,我们在几种酿酒酵母物种中鉴定出了一种新的 totivirus 真菌病毒,并对酿酒酵母的 MsMV1 真菌病毒进行了特征描述。我们找到了导致病毒清除的条件,并分析了同源的病毒感染/病毒清除菌株,以确定 MsMV1 的遗传和致病影响。MsMV1 诱导转录因子和核糖体基因的强烈过表达,同时下调细胞代谢。此外,MsMV1 在培养的巨噬细胞中诱导了更高水平的β干扰素表达。这项研究揭示了酿酒酵母致病性的机制,重点是一种以前未被识别的新型真菌病毒。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27de/7468202/c1c499be82ff/mBio.01534-20-f0001.jpg

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