Sepehri Sepideh, Arab S Shahriar, Behmanesh Mehrdad, H Sajedi Reza
Department of Biophysics, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran.
Department of Genetics, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran.
Iran J Biotechnol. 2020 Jan 1;18(1):e2561. doi: 10.30498/IJB.2020.197161.2561. eCollection 2020 Jan.
TGF-β isoforms play crucial roles in diverse cellular processes. Therefore, targeting and inhibiting TGF-β signaling pathway provides a potential therapeutic opportunity. TGF-β isoforms bind and bring the receptors (TβRII and TβRI) together to form a signaling complex in an ordered manner.
Herein, an antagonistic variant of TGF-β (AnTβ) has been designed and prepared to inhibit the formation of signaling complex and consequently its signaling pathway. This TGF-β homodimeric variant contains intact TβRII binding sites and blocked TβRI binding sites by substituting three peptide segments. So, AnTβ could only bind to TβRII, but prevent binding and recruitment of TβRI to form a signaling complex.
A reliable model of AnTβ was built and refined using molecular dynamics (MD) simulation, followed by investigating the interactions of AnTβ with the receptors using in silico docking studies. After expression of disulfide-linked AnTβ in a SHuffle strain and purification of the protein using affinity chromatography, its biological activity was evaluated using Mink lung epithelial cells (Mvl Lu).
No meaningful significant changes in AnTβ structure were observed when compared with the native protein. Based on the docking analysis, AnTβ binds to TβRII similar to TGF-β and its binding to TβRI was diminished considerably which was consistent with our design purpose. Cell-based bioassay indicated that AnTβ could modulate TGF-β-induced cell growth inhibition.
Our analysis suggests that the antagonistic potency of AnTβ can be used as an anti-TGFβ signaling factor in the future perspectives.
转化生长因子-β(TGF-β)亚型在多种细胞过程中发挥关键作用。因此,靶向并抑制TGF-β信号通路提供了一个潜在的治疗机会。TGF-β亚型以有序方式结合并使受体(TβRII和TβRI)聚集在一起形成信号复合物。
在此,设计并制备了一种TGF-β的拮抗变体(AnTβ),以抑制信号复合物的形成及其信号通路。这种TGF-β同二聚体变体包含完整的TβRII结合位点,并通过替换三个肽段来阻断TβRI结合位点。因此,AnTβ只能与TβRII结合,但会阻止TβRI的结合和募集以形成信号复合物。
使用分子动力学(MD)模拟构建并优化了AnTβ的可靠模型,随后通过计算机对接研究研究AnTβ与受体的相互作用。在SHuffle菌株中表达二硫键连接的AnTβ并使用亲和色谱法纯化该蛋白后,使用貂肺上皮细胞(Mvl Lu)评估其生物学活性。
与天然蛋白相比,未观察到AnTβ结构有有意义的显著变化。基于对接分析,AnTβ与TβRII的结合方式类似于TGF-β,并且其与TβRI的结合显著减少,这与我们的设计目的一致。基于细胞的生物测定表明,AnTβ可以调节TGF-β诱导的细胞生长抑制。
我们的分析表明,AnTβ的拮抗效力在未来有望用作抗TGFβ信号因子。