Genetics and Epigenetics Program, The University of Texas MD Anderson Cancer Center UTHealth Graduate School of Biomedical Sciences, Houston, TX 77030.
Department of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Proc Natl Acad Sci U S A. 2020 Sep 22;117(38):23663-23673. doi: 10.1073/pnas.2008474117. Epub 2020 Sep 8.
Cell stress and DNA damage activate the tumor suppressor p53, triggering transcriptional activation of a myriad of target genes. The molecular, morphological, and physiological consequences of this activation remain poorly understood in vivo. We activated a p53 transcriptional program in mice by deletion of , a gene that encodes the major p53 inhibitor. By overlaying tissue-specific RNA-sequencing data from pancreas, small intestine, ovary, kidney, and heart with existing p53 chromatin immunoprecipitation (ChIP) sequencing, we identified a large repertoire of tissue-specific p53 genes and a common p53 transcriptional signature of seven genes, which included but not Global p53 activation caused a metaplastic phenotype in the pancreas that was missing in mice with acinar-specific p53 activation, suggesting non-cell-autonomous effects. The p53 cellular response at single-cell resolution in the intestine altered transcriptional cell state, leading to a proximal enterocyte population enriched for genes within oxidative phosphorylation pathways. In addition, a population of active CD8+ T cells was recruited. Combined, this study provides a comprehensive profile of the p53 transcriptional response in vivo, revealing both tissue-specific transcriptomes and a unique signature, which were integrated to induce both cell-autonomous and non-cell-autonomous responses and transcriptional plasticity.
细胞应激和 DNA 损伤激活肿瘤抑制因子 p53,触发大量靶基因的转录激活。这种激活的分子、形态和生理后果在体内仍知之甚少。我们通过删除 基因来激活小鼠的 p53 转录程序,该基因编码主要的 p53 抑制剂。通过将胰腺、小肠、卵巢、肾脏和心脏的组织特异性 RNA 测序数据与现有的 p53 染色质免疫沉淀 (ChIP) 测序数据叠加,我们鉴定出了大量组织特异性 p53 基因和七个基因的常见 p53 转录特征,其中包括 但不包括 。全局 p53 激活导致胰腺出现化生表型,而在腺泡特异性 p53 激活的小鼠中则缺失,提示存在非细胞自主效应。在肠道中单细胞分辨率下的 p53 细胞反应改变了转录细胞状态,导致富含氧化磷酸化途径基因的近端肠细胞群体富集。此外,还募集了一群活跃的 CD8+T 细胞。综合来看,这项研究提供了体内 p53 转录反应的综合特征,揭示了组织特异性转录组和独特的特征,这些特征被整合起来,诱导了细胞自主和非细胞自主反应以及转录可塑性。