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基于蛋白质组数据的新型免疫原性分泌蛋白的计算机鉴定及实验验证

In Silico Identification of Novel Immunogenic Secreted Proteins of from Secretome Data and Experimental Verification.

作者信息

Shirani Ihsanullah, Zhang Hui, Zhao Gang, Lu Siyi, Marawan Marawan A, Dawood Ali, Chen Yingyu, Chen Xi, Chen Jianguo, Hu Changmin, Chen Huanchun, Guo Aizhen

机构信息

The State Key Laboratory of Agricultural Microbiology, Wuhan 430070, China.

College of Veterinary Medicine, Cooperative Innovation Centre of Substantial Pig Production, Huazhong Agricultural University, Wuhan 430070, China.

出版信息

Pathogens. 2020 Sep 21;9(9):770. doi: 10.3390/pathogens9090770.

Abstract

is a major pathogen, responsible for bovine respiratory diseases worldwide. The present lack of effective control measures leaves cattle owners at considerable perpetual risk of outbreaks. In this study, we identified secreted immunogenic proteins in silico as potential candidates for novel diagnostic agents and vaccines. We used immunoinformatics to analyze 438 proteins previously identified with a label-free proteomics analysis of virulent HB0801 (P1) and its attenuated P150 strains. The subcellular localization of these proteins was preliminarily screened and 59 proteins were found to be secreted extracellular proteins. Twenty-seven of these proteins contained a large number of predictive T-cell epitopes presented by major histocompatibility complex (MHC) class I and II molecules. Twenty-two of these 27 proteins had a high number of conformational B-cell epitopes, predicted from the corresponding 3D structural templates, including one unique to P1, two unique to P150, and 19 common to both strains. Five proteins were selected for further validation, and two of these, MbovP274 and MbovP570, were successfully expressed and purified. Both were confirmed to be secretory and highly immunogenic proteins that induced a mouse antibody response, reacted with cattle serum positive for infection, and significantly increased the production of interleukin 8 (IL-8), IL-12 and interferon (IFN-) during the secretion of these three cytokines by both mutants of these genes. These results should be useful in the development of novel immunological agents against infection.

摘要

是一种主要病原体,在全球范围内引发牛呼吸道疾病。目前缺乏有效的控制措施,使养牛户一直面临着疫情爆发的巨大风险。在本研究中,我们通过计算机分析确定了分泌性免疫原性蛋白,作为新型诊断试剂和疫苗的潜在候选物。我们利用免疫信息学分析了先前通过对强毒株HB0801(P1)及其减毒株P150进行无标记蛋白质组学分析鉴定出的438种蛋白质。对这些蛋白质的亚细胞定位进行了初步筛选,发现59种蛋白质是分泌到细胞外的蛋白质。其中27种蛋白质含有大量由主要组织相容性复合体(MHC)I类和II类分子呈递的预测性T细胞表位。这27种蛋白质中有22种具有大量从相应三维结构模板预测的构象性B细胞表位,包括1种P1特有的、2种P150特有的以及19种两株菌株共有的。选择了5种蛋白质进行进一步验证,其中两种,即MbovP274和MbovP570,成功表达并纯化。两者均被证实为分泌性且高度免疫原性的蛋白质,可诱导小鼠产生抗体反应,与感染阳性的牛血清发生反应,并在这两种基因的突变体分泌这三种细胞因子期间显著增加白细胞介素8(IL-8)、IL-12和干扰素(IFN-)的产生。这些结果应有助于开发针对感染的新型免疫制剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f5c/7559824/b89845aa1292/pathogens-09-00770-g001.jpg

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