• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于网格的 CYP3A4 模板系统在理解大尺寸配体相互作用机制中的应用;CYP3A4 模板研究的第 4 部分。

Applications of a grid-based CYP3A4 Template system to understand the interacting mechanisms of large-size ligands; part 4 of CYP3A4 Template study.

机构信息

Regulation and Prequalification, Access to Medicines and Health Products, World Health Organization, Avenue Appia 20, 1211, Geneva 27, Switzerland; Regulatory Science, Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1, Tanabe-dori, Mizuho-ku, Nagoya, 467-8603, Japan.

Division of Drug Metabolism and Molecular Toxicology, Graduate School of Pharmaceutical Sciences, Tohoku University, 6-3 Aramaki-Aoba, Aoba-ku, Sendai, 980-8578, Japan; Division of Risk Assessment, National Institute of Health Sciences, Tonomachi 3-25-26, Kawasaki-ku, Kanagawa, 210-9501, Japan.

出版信息

Drug Metab Pharmacokinet. 2020 Dec;35(6):485-496. doi: 10.1016/j.dmpk.2020.06.008. Epub 2020 Jul 15.

DOI:10.1016/j.dmpk.2020.06.008
PMID:32967779
Abstract

Catalytic interactions of CYP3A4 with large-size ligands have been studied on the Template established in our previous studies using polyaromatic hydrocarbon and steroid ligands (DMPK 34: 113-125 and 351-364 2019 and in press 2020). Typical CYP3A4-substrates including erythromycin, cyclosporin A (ca.1200 Da), ivermectin B1a and taxanes were applied successfully and regioselective metabolisms of these ligands were reconstituted faithfully on Template. These results suggest the applicability of CYP3A4 Template throughout broadened sizes of CYP3A4 ligands. Macrolide antibiotics showed distinct degrees of tight sittings in Width-gauge, a tool for accommodation measure. The observed differences were associated with different inhibitory/inactivation potentials of troleandomycin, erythromycin, clarithromycin and azithromycin, suggesting CYP3A4 Template also as a tool for drug-interaction mechanisms. Slight expansion of Template area was made at near Site of oxidation from simulation results of antitumor agent, rilpivirine, in the present study. Ligand entry from left side of Template is also suggested from macrolide interactions. Broadened applicability of the refined CYP3A4 Template were assured with experiments with various large-size ligands.

摘要

CYP3A4 与大尺寸配体的催化相互作用已在我们之前使用多环芳烃和甾体配体(DMPK34:113-125 和 351-364,2019 年和 2020 年即将出版)建立的模板上进行了研究。典型的 CYP3A4 底物包括红霉素、环孢素 A(约 1200 Da)、伊维菌素 B1a 和紫杉烷,这些配体的区域选择性代谢在模板上得到了成功重建。这些结果表明 CYP3A4 模板适用于广泛的 CYP3A4 配体大小。大环内酯类抗生素在宽度计(一种用于容纳度测量的工具)中显示出不同程度的紧密结合。观察到的差异与不同的抑菌/失活潜力有关,包括托罗霉素、红霉素、克拉霉素和阿奇霉素,这表明 CYP3A4 模板也可用作药物相互作用机制的工具。在本研究中,从模拟抗肿瘤药物利匹韦林的结果来看,模板的氧化部位附近的区域略有扩大。从大环内酯类相互作用来看,配体也可以从模板的左侧进入。通过使用各种大尺寸配体进行实验,确保了经过改进的 CYP3A4 模板具有更广泛的适用性。

相似文献

1
Applications of a grid-based CYP3A4 Template system to understand the interacting mechanisms of large-size ligands; part 4 of CYP3A4 Template study.基于网格的 CYP3A4 模板系统在理解大尺寸配体相互作用机制中的应用;CYP3A4 模板研究的第 4 部分。
Drug Metab Pharmacokinet. 2020 Dec;35(6):485-496. doi: 10.1016/j.dmpk.2020.06.008. Epub 2020 Jul 15.
2
Versatile applicability of a grid-based CYP3A4 Template to understand the interacting mechanisms with the small-size ligands; part 3 of CYP3A4 Template study.基于网格的 CYP3A4 模板在理解小分子配体相互作用机制方面的多功能适用性;CYP3A4 模板研究的第 3 部分。
Drug Metab Pharmacokinet. 2020 Jun;35(3):253-265. doi: 10.1016/j.dmpk.2020.01.001. Epub 2020 Jan 24.
3
Solving the interactions of steroidal ligands with CYP3A4 using a grid-base template system.利用网格基模板系统解决甾体配体与 CYP3A4 的相互作用。
Drug Metab Pharmacokinet. 2019 Dec;34(6):351-364. doi: 10.1016/j.dmpk.2019.05.003. Epub 2019 May 31.
4
Reconstitution of CYP3A4 active site through assembly of ligand interactions as a grid-template: Solving the modes of the metabolism and inhibition.通过将配体相互作用组装成网格模板来重构CYP3A4活性位点:解决代谢和抑制模式问题。
Drug Metab Pharmacokinet. 2019 Apr;34(2):113-125. doi: 10.1016/j.dmpk.2018.10.001. Epub 2018 Oct 15.
5
Development of template systems for ligand interactions of CYP3A5 and CYP3A7 and their distinctions from CYP3A4 template.CYP3A5 和 CYP3A7 配体相互作用模板系统的开发及其与 CYP3A4 模板的区别。
Drug Metab Pharmacokinet. 2021 Jun;38:100357. doi: 10.1016/j.dmpk.2020.09.002. Epub 2020 Sep 19.
6
Refined CYP2E1 Template system to decipher the ligand-interactions.优化的CYP2E1模板系统以解析配体相互作用。
Drug Metab Pharmacokinet. 2021 Dec;41:100413. doi: 10.1016/j.dmpk.2021.100413. Epub 2021 Aug 19.
7
The refined CYP2B6-Template system for studies of its ligand metabolisms.用于研究其配体代谢的优化CYP2B6模板系统。
Drug Metab Pharmacokinet. 2025 Feb;60:101037. doi: 10.1016/j.dmpk.2024.101037. Epub 2024 Nov 16.
8
Computational Prediction of the Site(s) of Metabolism and Binding Modes of Protein Kinase Inhibitors Metabolized by CYP3A4.基于 CYP3A4 代谢的蛋白激酶抑制剂的代谢部位和结合模式的计算预测。
Drug Metab Dispos. 2019 Jun;47(6):616-631. doi: 10.1124/dmd.118.085167. Epub 2019 Mar 22.
9
Comparison of catalytic properties of cytochromes P450 3A4 and 3A5 by molecular docking simulation.通过分子对接模拟比较细胞色素P450 3A4和3A5的催化特性
Drug Metab Lett. 2014;8(1):43-50. doi: 10.2174/1872312807666131229121228.
10
Quantitative prediction of macrolide drug-drug interaction potential from in vitro studies using testosterone as the human cytochrome P4503A substrate.以睾酮作为人细胞色素P4503A底物,通过体外研究对大环内酯类药物相互作用潜力进行定量预测。
Eur J Clin Pharmacol. 2006 Mar;62(3):203-8. doi: 10.1007/s00228-005-0091-x. Epub 2006 Jan 17.

引用本文的文献

1
Application of fused-grid-based CYP-Template systems for genotoxic substances to understand the metabolisms.基于融合网格的细胞色素P450模板系统在遗传毒性物质代谢研究中的应用。
Genes Environ. 2023 Aug 7;45(1):22. doi: 10.1186/s41021-023-00275-4.
2
Application of CYP1A2-Template System to Understand Metabolic Processes in the Safety Assessment.CYP1A2模板系统在安全性评估中理解代谢过程的应用。
Food Saf (Tokyo). 2022 Dec 23;10(4):129-139. doi: 10.14252/foodsafetyfscj.D-22-00008. eCollection 2022 Dec.
3
Deciphering Key Interactions of Ligands with CYP3A4-Template* system.
解析配体与CYP3A4模板*系统的关键相互作用
Food Saf (Tokyo). 2021 Feb 10;9(1):10-21. doi: 10.14252/foodsafetyfscj.D-20-00023. eCollection 2021 Mar.
4
Prediction and Characterization of CYP3A4-mediated Metabolisms of Azole Fungicides: an Application of the Fused-grid Template* system.细胞色素P450 3A4介导的唑类杀菌剂代谢的预测与表征:融合网格模板*系统的应用
Food Saf (Tokyo). 2020 Jun 26;8(2):34-51. doi: 10.14252/foodsafetyfscj.D-20-00010. eCollection 2020 Jun.