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利用变性梯度凝胶电泳(DGGE)鉴别高度降解、老化的亚洲象和非洲象象牙。

Discrimination of highly degraded, aged Asian and African elephant ivory using denaturing gradient gel electrophoresis (DGGE).

机构信息

Forensic Science Program, Department of Applied Science, Faculty of Science, Prince of Songkla University, 15 Karnjanavanich Road, Kho Hong, Hat Yai, Songkhla, 90110, Thailand.

College of Science and Engineering, Flinders University, Adelaide, SA, 5042, Australia.

出版信息

Int J Legal Med. 2021 Jan;135(1):107-115. doi: 10.1007/s00414-020-02414-w. Epub 2020 Sep 25.

DOI:10.1007/s00414-020-02414-w
PMID:32975592
Abstract

BACKGROUND

Elephant populations have greatly reduced mainly due to illegal poaching for their ivory. The trade in elephant products is protected by national laws and CITES agreements to prevent them from further decline. For instance, in Thailand, it is illegal to trade ivory from African elephants; however, the law allows possession of ivory from Asian elephants if permission has been obtained from the authorities. As such, means of enforcement of legislation are needed to classify the legal status of seized ivory products. Many DNA-based techniques have been previously reported for this purpose, although all have a limit of detection not suitable for extremely degraded samples.

AIM

We report an assay based on nested PCR followed by DGGE to confirm the legal or illegal status of seized ivory samples where it is assumed that the DNA will be highly degraded.

METHOD AND RESULTS

The assay was tested on aged ivory from which the assay was tested for reproducibility, specificity, and, importantly, sensitivity. Blind testing showed 100% identification accuracy. Correct assignment in all 304 samples tested was achieved including confirmation of the legal status of 227 highly degraded, aged ivories, thus underlining the high sensitivity of the assay.

CONCLUSION AND RECOMMENDATION

The research output will be beneficial to analyze ivory casework samples in wildlife forensic laboratories.

摘要

背景

由于非法偷猎象牙,大象数量大幅减少。为了防止大象进一步减少,国家法律和《濒危野生动植物种国际贸易公约》保护大象产品的贸易。例如,在泰国,交易来自非洲象的象牙是违法的;然而,如果从当局获得许可,法律允许拥有来自亚洲象的象牙。因此,需要执法手段来对查获的象牙制品的法律地位进行分类。为此,已经有许多基于 DNA 的技术被报道,尽管所有技术的检测限都不适合极降解的样本。

目的

我们报告了一种基于巢式 PCR 后 DGGE 的检测方法,以确认查获的象牙样本的合法或非法地位,因为这些象牙样本的 DNA 高度降解。

方法和结果

该方法在陈旧象牙上进行了测试,以检验其重现性、特异性,重要的是,敏感性。盲测显示 100%的识别准确率。在 304 个测试样本中,所有样本都得到了正确的鉴定,包括对 227 个高度降解的陈旧象牙的合法地位的确认,从而突出了该检测方法的高灵敏度。

结论和建议

研究结果将有助于在野生动物法庭实验室分析象牙案件样本。

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本文引用的文献

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A novel, 4-h DNA extraction method for STR typing of casework bone samples.一种新型的 4 小时 DNA 提取方法,用于法医骨骼样本的 STR 分型。
Int J Legal Med. 2020 Mar;134(2):461-471. doi: 10.1007/s00414-019-02232-9. Epub 2020 Jan 2.
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ELEquant: a developmental framework and validation of forensic and conservation real-time PCR assays.ELEquant:法医和保护领域实时荧光定量PCR检测方法的开发框架及验证
Mol Biol Rep. 2019 Apr;46(2):2093-2100. doi: 10.1007/s11033-019-04660-7. Epub 2019 Feb 5.
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Demography of a forest elephant population.
森林象种群的人口统计学
PLoS One. 2018 Feb 15;13(2):e0192777. doi: 10.1371/journal.pone.0192777. eCollection 2018.
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Mini-SNaPshot multiplex assays authenticate elephant ivory and simultaneously identify the species origin.微型快照多重分析可鉴定象牙并同时确定其物种来源。
Forensic Sci Int Genet. 2017 Mar;27:106-115. doi: 10.1016/j.fsigen.2016.12.007. Epub 2016 Dec 21.
5
Ivory species identification using electrophoresis-based techniques.使用基于电泳的技术进行象牙物种鉴定。
Electrophoresis. 2016 Dec;37(23-24):3068-3075. doi: 10.1002/elps.201600275. Epub 2016 Oct 18.
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A novel real time PCR assay using melt curve analysis for ivory identification.一种使用熔解曲线分析的新型实时PCR检测方法用于象牙鉴定。
Forensic Sci Int. 2016 Oct;267:210-217. doi: 10.1016/j.forsciint.2016.08.037. Epub 2016 Sep 12.
7
Use of handheld X-ray fluorescence as a non-invasive method to distinguish between Asian and African elephant tusks.使用手持式X射线荧光作为一种区分亚洲象和非洲象象牙的非侵入性方法。
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Real-time PCR detection and quantification of elephantid DNA: species identification for highly processed samples associated with the ivory trade.实时 PCR 检测和定量象类 DNA:与象牙贸易相关的高度加工样本的物种鉴定。
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