Gama João Alves, Zilhão Rita, Dionisio Francisco
Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, Tromsø, Norway.
Department of Plant Biology, Faculty of Sciences, University of Lisbon, Lisbon, Portugal.
Front Microbiol. 2020 Aug 31;11:2033. doi: 10.3389/fmicb.2020.02033. eCollection 2020.
It is difficult to understand plasmid maintenance in the absence of selection and theoretical models predict the conditions for plasmid persistence to be limited. Plasmid-associated fitness costs decrease bacterial competitivity, while imperfect partition allows the emergence of plasmid-free cells during cell division. Although plasmid conjugative transfer allows mobility into plasmid-free cells, the rate of such events is generally not high enough to ensure plasmid persistence. Experimental data suggest several factors that may expand the conditions favorable for plasmid maintenance, such as compensatory mutations and accessory genes that allow positive selection. Most of the previous studies focus on bacteria that carry a single plasmid. However, there is increasing evidence that multiple plasmids inhabit the same bacterial population and that interactions between them affect their transmission and persistence. Here, we adapt previous mathematical models to include multiple plasmids and perform computer simulations to study how interactions among them affect plasmid maintenance. We tested the contribution of different plasmid interaction parameters that impact three biological features: host fitness, conjugative transfer and plasmid loss - which affect plasmid persistence. The interaction affecting conjugation was studied in the contexts of intracellular and intercellular interactions, i.e., the plasmids interact when present in the same cell or when in different cells, respectively. First, we tested the effect of each type of interaction alone and concluded that only interactions affecting fitness (epistasis) prevented plasmid extinction. Although not allowing plasmid maintenance, intracellular interactions increasing conjugative efficiencies had a more determinant impact in delaying extinction than the remaining parameters. Then, we allowed multiple interactions between plasmids and concluded that, in a few cases, a combined effect of (intracellular) interactions increasing conjugation and fitness lead to plasmid maintenance. Our results show a hierarchy among these interaction parameters. Those affecting fitness favor plasmid persistence more than those affecting conjugative transfer and lastly plasmid loss. These results suggest that interactions between different plasmids can favor their persistence in bacterial communities.
在缺乏选择的情况下,很难理解质粒的维持,并且理论模型预测质粒持续存在的条件是有限的。与质粒相关的适应性成本会降低细菌的竞争力,而不完全分配会导致在细胞分裂过程中出现无质粒的细胞。尽管质粒接合转移可使质粒转移到无质粒的细胞中,但此类事件的发生率通常不足以确保质粒的持续存在。实验数据表明,有几个因素可能会扩大有利于质粒维持的条件,例如补偿性突变和允许进行正选择的辅助基因。以前的大多数研究都集中在携带单个质粒的细菌上。然而,越来越多的证据表明,多个质粒存在于同一细菌群体中,并且它们之间的相互作用会影响其传播和持久性。在这里,我们对先前的数学模型进行调整,以纳入多个质粒,并进行计算机模拟,以研究它们之间的相互作用如何影响质粒的维持。我们测试了影响三种生物学特性的不同质粒相互作用参数的作用:宿主适应性、接合转移和质粒丢失,这些特性会影响质粒的持久性。在细胞内和细胞间相互作用的背景下研究了影响接合的相互作用,即质粒分别在同一细胞中或不同细胞中时发生相互作用。首先,我们单独测试了每种相互作用类型的影响,并得出结论,只有影响适应性(上位性)的相互作用才能防止质粒灭绝。尽管不允许质粒维持,但提高接合效率的细胞内相互作用在延迟灭绝方面比其他参数具有更决定性的影响。然后,我们允许质粒之间进行多种相互作用,并得出结论,在少数情况下,增加接合和适应性的(细胞内)相互作用的综合作用会导致质粒维持。我们的结果显示了这些相互作用参数之间的层次关系。那些影响适应性的参数比那些影响接合转移的参数更有利于质粒的持续存在,而影响质粒丢失的参数则最不利于质粒持续存在。这些结果表明,不同质粒之间的相互作用有利于它们在细菌群落中的持续存在。