Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Robert-Rössle-Strasse 10, 13125, Berlin, Germany.
Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany.
Chemistry. 2021 Feb 1;27(7):2326-2331. doi: 10.1002/chem.202003947. Epub 2020 Dec 7.
The intrinsic lability of the phosphoramidate P-N bond in phosphorylated histidine (pHis), arginine (pHis) and lysine (pLys) residues is a significant challenge for the investigation of these post-translational modifications (PTMs), which gained attention rather recently. While stable mimics of pHis and pArg have contributed to study protein substrate interactions or to generate antibodies for enrichment as well as detection, no such analogue has been reported yet for pLys. This work reports the synthesis and evaluation of two pLys mimics, a phosphonate and a phosphate derivative, which can easily be incorporated into peptides using standard fluorenyl-methyloxycarbonyl- (Fmoc-)based solid-phase peptide synthesis (SPPS). In order to compare the biophysical properties of natural pLys with our synthetic mimics, the pK values of pLys and analogues were determined in titration experiments applying nuclear magnetic resonance (NMR) spectroscopy in small model peptides. These results were used to compute electrostatic potential (ESP) surfaces obtained after molecular geometry optimization. These findings indicate the potential of the designed non-hydrolyzable, phosphonate-based mimic for pLys in various proteomic approaches.
磷酸酰胺 P-N 键在磷酸化组氨酸 (pHis)、精氨酸 (pHis) 和赖氨酸 (pLys) 残基中的固有不稳定性是研究这些翻译后修饰 (PTMs) 的重大挑战,这些修饰最近才受到关注。虽然 pHis 和 pArg 的稳定类似物有助于研究蛋白质底物相互作用或生成用于富集和检测的抗体,但尚未报道 pLys 的类似物。本工作报道了两种 pLys 类似物,即膦酸酯和磷酸酯衍生物的合成和评估,它们可以使用标准的芴甲氧羰基- (Fmoc-) 固相肽合成 (SPPS) 轻松掺入肽中。为了比较天然 pLys 和我们合成的类似物的物理化学性质,在小模型肽中应用核磁共振 (NMR) 光谱的滴定实验中确定了 pLys 和类似物的 pK 值。这些结果用于计算分子几何优化后获得的静电势 (ESP) 表面。这些发现表明,所设计的不可水解的基于膦酸酯的 pLys 类似物在各种蛋白质组学方法中的潜力。