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本文引用的文献

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Prevalence of PD-L1 expression is associated with EMAST, density of peritumoral T-cells and recurrence-free survival in operable non-metastatic colorectal cancer.PD-L1 表达的流行率与可切除非转移性结直肠癌中的 EMAST、肿瘤周围 T 细胞密度和无复发生存相关。
Cancer Immunol Immunother. 2020 Aug;69(8):1627-1637. doi: 10.1007/s00262-020-02573-0. Epub 2020 Apr 20.
2
Integrated immune gene expression signature and molecular classification in gastric cancer: New insights.胃癌中整合的免疫基因表达特征和分子分类:新见解。
J Leukoc Biol. 2020 Aug;108(2):633-646. doi: 10.1002/JLB.4MR0120-221R. Epub 2020 Mar 14.
3
EPIC: A Tool to Estimate the Proportions of Different Cell Types from Bulk Gene Expression Data.EPIC:一种从批量基因表达数据估计不同细胞类型比例的工具。
Methods Mol Biol. 2020;2120:233-248. doi: 10.1007/978-1-0716-0327-7_17.
4
The emerging roles of N6-methyladenosine (m6A) deregulation in liver carcinogenesis.N6-甲基腺苷(m6A)失调在肝癌发生中的新作用。
Mol Cancer. 2020 Feb 28;19(1):44. doi: 10.1186/s12943-020-01172-y.
5
Surgical Treatment of Hepatocholangiocarcinoma: A Systematic Review.肝门胆管癌的外科治疗:一项系统评价
Liver Cancer. 2020 Jan;9(1):15-27. doi: 10.1159/000503719. Epub 2019 Nov 1.
6
RBPTD: a database of cancer-related RNA-binding proteins in humans.RBPTD:一个人类癌症相关 RNA 结合蛋白数据库。
Database (Oxford). 2020 Jan 1;2020. doi: 10.1093/database/baz156.
7
Challenges of combination therapy with immune checkpoint inhibitors for hepatocellular carcinoma.免疫检查点抑制剂联合治疗肝细胞癌的挑战。
J Hepatol. 2020 Feb;72(2):307-319. doi: 10.1016/j.jhep.2019.09.025.
8
Gut microbiome in HCC - Mechanisms, diagnosis and therapy.肝癌中的肠道微生物组:机制、诊断与治疗。
J Hepatol. 2020 Feb;72(2):230-238. doi: 10.1016/j.jhep.2019.08.016.
9
B Cells and T Follicular Helper Cells Mediate Response to Checkpoint Inhibitors in High Mutation Burden Mouse Models of Breast Cancer.B 细胞和 T 滤泡辅助细胞介导乳腺癌高突变负荷小鼠模型对检查点抑制剂的反应。
Cell. 2019 Nov 14;179(5):1191-1206.e21. doi: 10.1016/j.cell.2019.10.028.
10
Role of liver biopsy in hepatocellular carcinoma.肝活检在肝细胞癌中的作用。
World J Gastroenterol. 2019 Oct 28;25(40):6041-6052. doi: 10.3748/wjg.v25.i40.6041.

基于多个数据库的综合分析免疫相关基因,建立用于诊断和预测肝细胞癌的风险模型。

Systematic analysis of immune-related genes based on a combination of multiple databases to build a diagnostic and a prognostic risk model for hepatocellular carcinoma.

机构信息

Hepatobiliary Surgery Department, Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.

出版信息

Cancer Immunol Immunother. 2021 Mar;70(3):773-786. doi: 10.1007/s00262-020-02733-2. Epub 2020 Sep 28.

DOI:10.1007/s00262-020-02733-2
PMID:32989553
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10991371/
Abstract

The immune microenvironment plays a vital role in the progression of hepatocellular carcinoma (HCC). Thousands of immune-related genes (IRGs) have been identified, but their effects on HCC are not fully understood. In this study, we identified the differentially expressed IRGs and analyzed their functions in HCC in a systematic way. Furthermore, we constructed a diagnostic and a prognostic model using multiple statistical methods, and both models had good distinguishing performance, which we verified in several independent datasets. This diagnostic model was also adaptable to proteomic data. The combination of a prognostic risk model and classic clinical staging can effectively distinguish patients in high- and low-risk groups. Furthermore, we systematically explore the differences in the immune microenvironment between the high-risk group and the low-risk group to help clinical decision-making. In summary, we systematically analyzed immune-related genes in HCC, explored their functions, constructed a diagnostic and a prognostic model and investigated potential therapeutic schedules in high-risk patients. The model performance was verified in multiple databases. Our findings can provide directions for future research.

摘要

免疫微环境在肝细胞癌(HCC)的进展中起着至关重要的作用。已经鉴定出数千个免疫相关基因(IRGs),但它们对 HCC 的影响尚不完全清楚。在这项研究中,我们系统地鉴定了差异表达的 IRGs,并分析了它们在 HCC 中的功能。此外,我们使用多种统计方法构建了诊断和预后模型,两个模型都具有良好的区分性能,我们在几个独立的数据集上进行了验证。该诊断模型也可适用于蛋白质组学数据。预后风险模型与经典临床分期的结合可以有效区分高风险组和低风险组的患者。此外,我们系统地探讨了高危组和低危组之间免疫微环境的差异,以帮助临床决策。总之,我们系统地分析了 HCC 中的免疫相关基因,探讨了它们的功能,构建了诊断和预后模型,并研究了高危患者的潜在治疗方案。该模型在多个数据库中得到了验证。我们的研究结果可为未来的研究提供方向。