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基于卷积神经网络迁移学习的扩散磁共振成像自动检测青少年肌阵挛性癫痫

Automated Detection of Juvenile Myoclonic Epilepsy using CNN based Transfer Learning in Diffusion MRI.

作者信息

Si Xiaopeng, Zhang Xingjian, Zhou Yu, Sun Yulin, Jin Weipeng, Yin Shaoya, Zhao Xin, Li Qiang, Ming Dong

出版信息

Annu Int Conf IEEE Eng Med Biol Soc. 2020 Jul;2020:1679-1682. doi: 10.1109/EMBC44109.2020.9175467.

DOI:10.1109/EMBC44109.2020.9175467
PMID:33018319
Abstract

Epilepsy is one of the largest neurological diseases in the world, and juvenile myoclonic epilepsy (JME) usually occurs in adolescents, giving patients tremendous burdens during growth, which really needs the early diagnosis. Advanced diffusion magnetic resonance imaging (MRI) could detect the subtle changes of the white matter, which could be a non-invasive early diagnosis biomarker for JME. Transfer learning can solve the problem of insufficient clinical samples, which could avoid overfitting and achieve a better detection effect. However, there is almost no research to detect JME combined with diffusion MRI and transfer learning. In this study, two advanced diffusion MRI methods, high angle resolved diffusion imaging (HARDI) and neurite orientation dispersion and density imaging (NODDI), were used to generate the connectivity matrix which can describe tiny changes in white matter. And three advanced convolutional neural networks (CNN) based transfer learning were applied to detect JME. A total of 30 participants (15 JME patients and 15 normal controls) were analyzed. Among the three CNN models, Inception_resnet_v2 based transfer learning is better at detecting JME than Inception_v3 and Inception_v4, indicating that the "short cut" connection can improve the ability to detect JME. Inception_resnet_v2 achieved to detect JME with the accuracy of 75.2% and the AUC of 0.839. The results support that diffusion MRI and CNN based transfer learning have the potential to improve the automated detection of JME.

摘要

癫痫是世界上最常见的神经系统疾病之一,青少年肌阵挛性癫痫(JME)通常发生在青少年时期,给患者的成长带来巨大负担,因此急需早期诊断。先进的扩散磁共振成像(MRI)能够检测白质的细微变化,这可能是JME的一种非侵入性早期诊断生物标志物。迁移学习可以解决临床样本不足的问题,避免过拟合并实现更好的检测效果。然而,几乎没有研究将扩散MRI与迁移学习相结合来检测JME。在本研究中,使用了两种先进的扩散MRI方法,即高角分辨率扩散成像(HARDI)和神经突方向离散度与密度成像(NODDI)来生成能够描述白质微小变化的连接矩阵。并且应用了三种基于深度卷积神经网络(CNN)的迁移学习方法来检测JME。总共分析了30名参与者(15名JME患者和15名正常对照)。在这三种CNN模型中,基于Inception_resnet_v2的迁移学习在检测JME方面比Inception_v3和Inception_v4表现更好,这表明“捷径”连接可以提高检测JME的能力。Inception_resnet_v2检测JME的准确率达到75.2%,曲线下面积(AUC)为0.839。结果表明,扩散MRI和基于CNN的迁移学习有潜力改善JME的自动检测。

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