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散发性乳腺癌中 TP53 R337H 变异的频率及其对基因组不稳定性的影响。

Frequency of the TP53 R337H variant in sporadic breast cancer and its impact on genomic instability.

机构信息

Graduate Program of Genetics, Department of Genetics, Federal University of Paraná, Curitiba, Paraná, 81531980, Brazil.

Faculdades Pequeno Príncipe, Instituto de Pesquisa Pelé Pequeno Príncipe, Curitiba, Paraná, 80250060, Brazil.

出版信息

Sci Rep. 2020 Oct 6;10(1):16614. doi: 10.1038/s41598-020-73282-y.

Abstract

The R337H is a TP53 germline pathogenic variant that has been associated with several types of cancers, including breast cancer. Our main objective was to determine the frequency of the R337H variant in sporadic breast cancer patients from Paraná state, South Brazil, its association with prognosis and its impact in genomic instability. The genotyping of 805 breast cancer tissues revealed a genotypic and allelic frequency of the R337H variant of 2.36% and 1.18%, respectively. In these R337H+ cases a lower mean age at diagnosis was observed when compared to the R337H-cases. Array-CGH analysis showed that R337H+ patients presented a higher number of copy number alterations (CNAs), compared to the R337H-. These CNAs affected genes and miRNAs that regulate critical cancer signaling pathways; a number of these genes were associated with survival after querying the KMplot database. Furthermore, homozygous (R337H+/R337H+) fibroblasts presented increased levels of copy number variants when compared to heterozygous or R337H- cells. In conclusion, the R337H variant may contribute to 2.36% of the breast cancer cases without family cancer history in Paraná. Among other mechanisms, R337H increases the level of genomic instability, as evidenced by a higher number of CNAs in the R337H+ cases compared to the R337H-.

摘要

R337H 是一种 TP53 种系致病性变异,与多种癌症有关,包括乳腺癌。我们的主要目的是确定 R337H 变异在南里奥格兰德州巴西散发性乳腺癌患者中的频率,其与预后的关系及其对基因组不稳定性的影响。对 805 例乳腺癌组织进行基因分型显示,R337H 变异的基因型和等位基因频率分别为 2.36%和 1.18%。在这些 R337H+病例中,与 R337H-病例相比,诊断时的平均年龄较低。阵列-CGH 分析显示,与 R337H-病例相比,R337H+患者的拷贝数改变(CNAs)数量更多。这些 CNA 影响了调节关键癌症信号通路的基因和 miRNA;查询 KMplot 数据库后,发现其中一些基因与生存有关。此外,与杂合子(R337H+/R337H-)或 R337H-细胞相比,纯合子(R337H+/R337H+)成纤维细胞的拷贝数变异水平更高。总之,R337H 变异可能导致南里奥格兰德州无家族癌症史的乳腺癌病例占 2.36%。除其他机制外,R337H 增加了基因组不稳定性的水平,这可以从 R337H+病例中比 R337H-病例中更高数量的 CNA 得到证明。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e0dc/7539008/14bb068a8199/41598_2020_73282_Fig1_HTML.jpg

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