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通过QTAIM方法对3-(2,6-二氯苯基)-丙烯酰胺及其二聚体进行合成、光谱分析、分子对接和密度泛函理论研究。

Synthesis, spectral analysis, molecular docking and DFT studies of 3-(2, 6-dichlorophenyl)-acrylamide and its dimer through QTAIM approach.

作者信息

Shukla Akhilesh Kumar, Chaudhary Aniruddh Prasad, Pandey Jyoti

机构信息

Department of Chemistry, Babasaheb Bhimrao Ambedkar University (A Central University), Lucknow 226025, Uttar Pradesh, India.

Department of Chemistry, Udai Pratap College (An Autonomous Institution) Varanasi, Uttar Pradesh, India 221002.

出版信息

Heliyon. 2020 Oct 3;6(10):e05016. doi: 10.1016/j.heliyon.2020.e05016. eCollection 2020 Oct.

Abstract

In this paper, an experimental study of ()-3-(2,6-dichlorophenyl)-acrylamide and its associated dimer were analysed with molecular docking, DFT and QTAIM approach. To spot, describe, and measure the non-covalent interactions (NCIs) of the atoms in the molecules of the monomer and its dimer, some important topological parameters of the charge densities, acquired from the Bader's QTAIM tool are determined, quantitatively. The bond paths are shown to persist for a range of five types of NCIs such as weak conventional (C-H···Cl) and nonconventional (C-O···C and N-O···Cl), medium (N-H···Cl) and strong O-H···O NCIs revealed by the existence of BCPs (ranging from 1.921 - 3.259 Å). A comprehensive explanation of the spectroscopic data like vibrational, electronic, and NMR spectra is reported along with the NLO, reactivity. Hydroxamic acid exhibited an excellent nonlinear optical activity (β = 14.8098 × 10). To predict the various reactive sites in the molecule, molecular electrostatic potential diagrams were displayed.

摘要

在本文中,采用分子对接、密度泛函理论(DFT)和量子拓扑原子分子理论(QTAIM)方法对()-3-(2,6-二氯苯基)丙烯酰胺及其相关二聚体进行了实验研究。为了识别、描述和测量单体及其二聚体分子中原子的非共价相互作用(NCI),定量确定了从巴德QTAIM工具获得的电荷密度的一些重要拓扑参数。键径显示在一系列五种类型的NCI中持续存在,如弱常规(C-H···Cl)和非常规(C-O···C和N-O···Cl)、中等(N-H···Cl)和强O-H···O NCI,这通过键临界点(BCP)的存在得以揭示(范围为1.921 - 3.259 Å)。报告了对光谱数据(如振动、电子和核磁共振光谱)以及非线性光学(NLO)、反应活性的全面解释。异羟肟酸表现出优异的非线性光学活性(β = 14.8098 × 10)。为了预测分子中的各种反应位点,展示了分子静电势图。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7305/7533364/47d885ca34f6/sc1.jpg

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