Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India.
Department of Chemical Pathology, School of Pathology, Faculty of Health Sciences and National Health Laboratory Service, University of the Free State, Bloemfontein, South Africa.
J Biomol Struct Dyn. 2022 Mar;40(4):1629-1638. doi: 10.1080/07391102.2020.1830855. Epub 2020 Oct 9.
Prostate cancer (PC) is one of the major impediments affecting men, which leads approximately 31,620 deaths in both developing and developed countries. Although some chemotherapy drugs have been reported for prostate cancer, they are not effective due to the lack of safety, efficacy and low selectivity. Hence, the novel alternative anticancer agents with remarkable effect are highly appreciable. Natural plants contain several bio-active compounds which have been traditionally used for the various medical treatments. Particularly, naringin is a natural bio-active compound commonly found in the citrus fruits, which have shown numerous biological activities. Phosphatase and tensin homolog (PTEN) is a tumor suppressor gene, which activates both lipid phosphates and protein phosphates. The PTEN gene is negative regulator of PI3K/AKT/mTOR pathways, since, this signaling pathway play an essential role in the cell survival, proliferation and migration. In the present investigation, structure based virtual screening, molecular docking, molecular dynamics simulation and Adsorption, Distribution, Metabolism, Excretion (ADME) prediction were employed to determine the binding affinity, stability and drug likeness properties of top ranked screened compounds and naringin, respectively. The results revealed that the complex has good molecular interactions, binding stability (peak between 0.3 and 0.4 nm) and no violations in the Lipinski Rule of 5 in naringin, but the screened compounds violated the drug likeness properties. From the analyses, it is identified that naringin compound might assist in the development of novel therapeutic candidate against prostate cancer. Communicated by Ramaswamy H. Sarma.
前列腺癌(PC)是影响男性的主要障碍之一,在发展中国家和发达国家约导致 31620 人死亡。尽管已经报道了一些用于前列腺癌的化疗药物,但由于缺乏安全性、疗效和低选择性,它们并不有效。因此,具有显著效果的新型抗癌药物替代品受到高度赞赏。天然植物含有几种生物活性化合物,这些化合物已被传统用于各种医疗用途。特别是柚皮苷是一种常见于柑橘类水果中的天然生物活性化合物,具有多种生物学活性。磷酸酶和张力蛋白同源物(PTEN)是一种肿瘤抑制基因,可激活脂质磷酸和蛋白磷酸。PTEN 基因是 PI3K/AKT/mTOR 通路的负调节剂,因为该信号通路在细胞存活、增殖和迁移中起着至关重要的作用。在本研究中,基于结构的虚拟筛选、分子对接、分子动力学模拟和吸附、分布、代谢、排泄(ADME)预测被用来确定筛选出的化合物和柚皮苷的结合亲和力、稳定性和药物相似性。结果表明,该复合物具有良好的分子相互作用、结合稳定性(在 0.3 到 0.4nm 之间的峰值)和柚皮苷中没有违反 Lipinski 五规则,但筛选出的化合物违反了药物相似性。从分析中可以看出,柚皮苷化合物可能有助于开发针对前列腺癌的新型治疗候选药物。由 Ramaswamy H. Sarma 传达。